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Tag: genetics

Naeela Qureshi

Naeela Qureshi is a wheat rust pathologist and molecular geneticist at CIMMYT in Mexico, facilitating extensive research on wheat rust in Mexico and Kenya. Her role is critical in supporting the breeding and physiology teams of CIMMYT’s Global Wheat Program. She also focuses on unraveling the genetic components of rust resistance through Quantitative Trait Loci (QTL) mapping. Naeela uses advanced bi-parental recombinant inbred line (RIL) populations and develops molecular markers linked to rust resistance genes and QTL to improve marker-assisted breeding strategies.

Previously, Naeela was a Research Scientist-Molecular Genetics at Agriculture Victoria Research, Australia, specializing in next-generation sequencing (NGS) technologies such as targeted genotyping by sequencing (tGBS), RNA sequencing, and amplicon resequencing across diverse genetic populations and lines. She received her Ph.D. from the University of Sydney, Australia.

Dragan Milic

Dragan Milic is responsible for providing support to the National Agriculture Research Systems (NARS) in Africa, assisting them in the development of breeding improvement plans aimed at delivering increased genetic gains for smallholder farmers. These enhancement strategies will specifically target product profiles, optimization of breeding schemes, utilization of genotyping, automation, mechanization, appropriate breeding software, and establishment of connections with seed producers.

Milić also extends support to national breeding teams in African countries, implementing a comprehensive internal breeding pipeline optimization plan supported by the Excellence in Breeding platform. Furthermore, he assists national partners in integrating and establishing breeding networks with CGIAR institutes and regional and national collaborators.

Before joining CIMMYT, Dragan Milić spent his professional career at the Institute of Field and Vegetable Crops (IFVCNS) in Novi Sad, Serbia. He served as the Head of the Forage Breeding team at IFVCNS and possesses over 20 years of experience in breeding, seed production, and leadership in conventional and molecular alfalfa/forage breeding. Dragan Milić has been a visiting scientist at the Samuel Roberts Noble Foundation and UC Davis through different scholarships funded by the Serbian and US governments.

His main expertise is related to forage and grain legumes breeding, field-based experiment phenotyping, legume genetics, and forage and grain legumes seed systems. He was involved in defining strategies based on conventional and molecular breeding efforts towards variety selection and the development of improved forage/alfalfa germplasm for Southern East Europe and Asia. Dragan is the author of many alfalfa/grain legumes varieties released in Serbia, Belarus, Morocco, Turkey, Ukraine, and the EU.

Lennin Musundire

Lennin Musundire is responsible for supporting the National Agriculture Research Systems (NARS) in Africa to develop breeding improvement plans to deliver higher genetic gains targeted at smallholder farmers. These improvement plans will focus on product profiles, breeding scheme optimization, use of genotyping, automation, mechanization, appropriate breeding software and links with seed producers. Provides support to national breeding teams in African countries, implements an all-inclusive internal breeding pipeline optimization plan supported by the Excellence in Breeding platform as well as supports national partners to integrate and build breeding networks with CGIAR institutes and regional, national partners.

 

Peter Setimela

Peter Setimela is CIMMYT Country Representative for Zambia and Legume Seed Systems Lead for the AID- Project.

Setimela is a seed systems scientist with over 20 years of experience in CG centers, universities, and national agricultural research institutes.

A credible and innovative scientist with strong technical, commercial, and financial acumen and extensive experience in leading multi-cultural teams to deliver ground-breaking agricultural initiatives primarily in the Eastern and Southern African regions. Demonstrates a comprehensive portfolio of skills including research and development, technology scaling, program management, advocacy, partnerships, capacity building, logistics, team leadership, operations, fundraising, and training. An adaptable and resilient leader with strong communication and influencing skills and the ability to unite diverse agendas to achieve outstanding results.

Visiting Chinese scholar devoted to agricultural research in Mexico

CIMMYT stands out for its role in agricultural innovation, demonstrated through the dedicated research of visiting Chinese scholar Wang Hui. Her tenure at CIMMYT underscores the center’s pivotal role in driving agricultural advancements through international partnerships, significantly contributing to global food security and scientific development.

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CIMMYT wheat varieties help Ethiopia’s farmers mitigate devastating rust diseases

Ethiopia is the largest wheat producer in East Africa, with about 65% share of the total wheat production in sub-Saharan Africa. The area under wheat increased from about 1.5 million hectares in 2010 to 2.5 million hectares in 2023. More importantly, the productivity increased from 1.8 tons per hectare to about 3 tons per hectare in the same period, implying an increase of about 5% per annum in productivity (See Figure 1).

Several factors have contributed to this spectacular increase in productivity, including better farm practices implemented through clustering farmers land to reduce production costs, and introducing new, improved varieties which enable farmers to withstand challenges of crop diseases.

Figure 1: Wheat grain yield trends in Ethiopia by decade, 1960 to 2022 (USDA data).

A DNA finger printing study found that about 87% of the wheat area in Ethiopia comprises of varieties developed by the International Maize and Wheat Improvement Center (CIMMYT). In 2023, the Ethiopian Institute of Agricultural Research (EIAR) released six new wheat varieties of CIMMYT origin aimed for the mid to highlands (> 1800 meters above sea level) and lowlands (< 1800 masl) of the country. “These newly released varieties provide options for farmers to face devastating rust diseases and at the same time obtain higher productivity,” said wheat breeder Leonardo Crespo.

Gadisa Alemu, wheat breeder based in EIAR, Kulumsa, added that the CIMMYT varieties were tested in farmers’ fields prior to release. “This allows participating farmers to have quicker access to seed of selected varieties,” he said.

Wheat breeders . The aim was to obtain additional insights into the activities of CIMMYT’s partners and co-design a strategy that allows early evaluation and access to CIMMYT germplasm by national partners in Ethiopia. The team visited research centers in Holetta (highlands), Debre Zeit and, Kulumsa (midlands), and Arsi Negele (lowlands). Kulumsa, together with the highlands of Meraro and Asasa plains, represent about 60-70% of the wheat area in Ethiopia.  “These are important sites for wheat breeding activities in Ethiopia. Given that Holetta and Debre Zeit are hot spots for diseases, there is an increased interest in the Arsi Negele region to expand wheat production under irrigated conditions,” said Bekele Abeyo, wheat breeder and CIMMYT’s Ethiopia Country Representative.

AGG Maize and Wheat Improvement Teams Meet with Partners to Develop CG-NARES Breeding Strategy

In the first fortnight of September 2023, researchers from the International Maize and Wheat Improvement Center (CIMMYT) and National Agriculture Research and Extension System (NARES) met in Nairobi, Kenya to create high-level strategies and guiding principles for CG-NARES breeding activities. This is in alignment with the ‘Genetic Innovations’ initiative of the One CGIAR strategy. CIMMYT representation included breeding teams from the wheat, maize, and dryland crops. The meetings were organized by Bill & Melinda Gates Foundation and CIMMYT’s Accelerating Genetic Gains in Maize and Wheat (AGG) project team.

It was recognized that the aforesaid strategies and principles need to be based on the biology of the crops and the context of each breeding program; incorporate the logistics of the breeding operations; and implement data driven tools for decision making such as genomic selection.

Participants shared how the application of novel and innovative technologies shortens the breeding cycles, accelerates the rate of genetic gain, and provides tools to enable the evaluation of plant materials (future variety candidates) and future target environments where these varieties will be grown.

It was concluded that effective breeding networks can be a strong instrument to enable faster delivery of improved germplasm to farmers. For this to happen efficiently, the networks require a high degree of coordination, organizational structure, governance, and clarity of roles. “It is fundamental for network members to agree the objectives, vision and expected outcomes of collaborative activities. This forms the basis for co-design and co-implementation of crop improvement plans” said Kevin Pixley, Interim Director of the Global Wheat Program and Director of the Dryland Crops Program.

The meeting also served as a platform for AGG’s and dryland crop’s breeding teams to exchange ideas and experiences. For instance, the Maize team shared their experience and learnings from on-farm-testing activities. The Wheat team shared the evolution and path of breeding modernization and implementation of new technologies. The Dryland Crops team shared their experience with co-designing and co-implementing breeding networks with NARES partners in Africa.

Xavier Mhike

Xavier Mhike is the Scientist – Product Development for Southern Africa at CIMMYT HQ in Mexico.

Zerihun Tadesse Tarekegn

Zerihun Tadesse is an associate scientist in the Global Wheat Program based in Mexico. His research focus is on developing and implementing modern breeding strategies to accelerate genetic gain in bread wheat populations. His goal is to develop high-yielding, early maturing, disease-resistant, and nutritious bread wheat lines for large target areas in South Asia and Sub-Saharan Africa.

Ulises Daniel Alvarez Chavez

Ulises Daniel Alvarez Chavez is a Laboratory Research Technician with the Genetic Resources Program at CIMMYT HQ in Mexico. His work includes:

  • DNA and RNA Insolation, culture of groundnut for development aflatoxins resistant varieties.
  • Tissue culture and molecular biology to complement gene editing experiments.
  • Development and standardization of protocols and PCR.
  • Virus inoculation and plant phenotyping.
  • Development of high performance allele selection methods and identification of the desired cross material.

Harish Gandhi

Harish Gandhi is a Breeding Lead for Dryland Legumes and Cereals in CIMMYT’s Genetic Resources program in Kenya. He is a transformative plant breeding and genetics professional, with more than 15 years experience of driving genetic gains, building effective teams, and pioneering innovative research and development.

David Omar Gonzalez Dieguez

David Omar Gonzalez Dieguez is a Post-Doctoral Fellow – Molecular Pre-Breeder in the Global Wheat Program at CIMMYT. He leads the application and integration of molecular tools in research and pre-breeding activities in wheat physiology.

In the research context, Dieguez focuses on the genetic basis of physiological traits related to yield components and climate resilience for yield potential, heat, and drought adaptation by performing GWAS analyses for gene/marker/QTL discovery and establishing marker validation for pre-breeding and breeding application to assist stacking of complementary physiological and agronomic traits.

In the pre-breeding context, Dieguez conducts the application and integration of genomic-assisted breeding tools (i.e. MAS/MABC and GS) at appropriate stages of the pre-breeding pipeline to support pre-breeder’s decisions for selecting lines for yield potential and tolerance to heat and drought stress and for trait introgression.

Shubham Bhagat

Shubham Bhagat is currently working on the Climate Resilience Agriculture program and has expertise in agriculture mechanization and equipment, remote sensing, drone usage and farmer welfare programs, and research on varieties development.

Building capacities in genetic resources and seed production strengthens collaboration ties between Guatemala and CIMMYT

Field day on maize seed production. (Photo: CIMMYT)

More than 20 participants attended the genetic resources and seed production courses given by researchers from the Global Maize Program of the International Maize and Wheat Improvement Center (CIMMYT), from October 24 to 28 in Antigua, Guatemala. Among the attendees were technicians and researchers from the Institute of Agricultural Science and Technology (ICTA, for its acronym in Spanish), as well as students from Universidad Rafael Landívar and the University Centers of Chimaltenango (CUNDECH, in Spanish) and Quiché (CUSACQ, in Spanish) of Universidad de San Carlos de Guatemala.

Thanks to the support of the Global Environment Facility (GEF), the Tropical Agricultural Research and Higher Education Center (CATIE, in Spanish), the National Council for Protected Areas (CONAP, in Spanish) and the United Nations Environment Program (UNEP), these courses contributed to the development of a biosafety project, supported by GEF and UNEP, to complete the implementation process of the Cartagena Protocol through an innovative approach that promotes a strong link between biotechnology and biodiversity. In addition, it sought to strengthen capacities in the performance and interpretation of molecular analyses and promote the generational change that is gradually taking place in this Central American country.

Activities began on October 24 and 25 with the course on Statistics Applied to Genetic Resources given by Juan Burgueño, Head of CIMMYT’s Biometrics and Statistics Unit, to students from the aforementioned universities and ICTA staff interested in the analysis of molecular data for the purpose of characterizing accessions and the formation of core collections in germplasm banks. On the 26 and 27 of the same month, CĂ©sar Petroli, a specialist in high-throughput genotyping at CIMMYT, offered a course on biotechnology and high-throughput genotyping.

ICTA seed production leaders and CIMMYT course facilitators. (Photo: CIMMYT)

At the same time, Alberto Chassaigne, curator of the Maize Collection of CIMMYT’s germplasm bank, participated in the course on Genetic Resources and Management of Germplasm Banks. He explained the management of CIMMYT’s germplasm bank, the processes that are carried out and the partnerships with ICTA on work with community seed banks and the plans of both institutions for 2023. Also, as a specialist in Seed Systems, Chassaigne and Ubaldo Marcos, research assistant in CIMMYT’s Maize Seed Systems area, gave a course on Maize Seed Production. This course was aimed at staff in charge of the production of basic and certified seed at ICTA. This course concluded with a field day at the Regional Research Center of the South (CISUR, in Spanish), Cuyuta, Escuintla, where participants asked the specialists questions while visiting a maize seed production plot.

In turn, María de los Ángeles Mérida, a researcher specializing in genetic resources from ICTA, who organized these courses, spoke about the collection and conservation of native varieties of maize in Guatemala. Additionally, César Azurdia, CONAP biodiversity advisor, gave a presentation on wild relatives of different crops in Guatemala. Leslie Melisa Ojeda C. (CONAP) also participated, and spoke about the issue of legislation on crop wild relatives; and, Mynor Otzoy, a researcher from Universidad de San Carlos de Guatemala, spoke about the collection and morphological characterization of cocoa germplasm in Guatemala.

Along the path of constant strengthening of collaboration ties with countries, course participants highlighted their interest and need to continue this type of training. In 2023, it is expected to facilitate a team training with Ubaldo Marcos and Félix San Vicente, CIMMYT maize breeder for Latin America. It should be noted that, within the framework of the CGIAR germplasm bank initiative, the objective will be to replicate this experience in other Latin American countries and increase participation in community seed banks (ex situ and in situ banks).

Kenya Lifts 10-year Ban On GM Foods, Allows Open Cultivation, Importation Of White GM Maize

Food crops and animal feeds produced through biotechnology innovations can now be imported into Kenya after the ban on genetically modified organisms (GMOs) was lifted.

Kenyan scientists and research institutions are now able to develop crop varieties that will benefit farmers and their communities.

In a landmark statement on October 3, the Cabinet said: “In accordance with the recommendation of the Task Force to review matters relating to GMOs and Food Safety, and in fidelity with the guidelines of the National Biosafety Authority (NBA) on all applicable international treaties including the Cartagena Protocol on Biosafety (CPB), Cabinet vacated its earlier decision of 8th November 2012 prohibiting the open cultivation of GMOs and the importation of food crops and animal feeds produced through biotechnology innovations; effectively lifting the ban on GMOs. By dint of the executive action open cultivation and importation of white (GMO) maize is now authorized.”

Read the original article: Kenya Lifts 10-year Ban On GM Foods, Allows Open Cultivation, Importation Of White GM Maize

Cover photo: A decade-long ban on genetically modified foods has been lifted in Kenya. (Photo: New Nigerian Newspaper)

Gene Editing for Reducing Aflatoxin in Groundnuts

The Gene Editing for Reducing Aflatoxin in Groundnuts project seeks to advance safer and nutritious groundnut varieties with durable genetic resistance to Aspergilli infection and aflatoxin contamination via gene editing. These new technologies will help address associated health and disease burdens, malnutrition, and trade and economic losses for smallholder farming communities in sub-Saharan Africa and globally. The main output of this project will be gene-edited varieties with reduced levels of aflatoxins.