Skip to main content

research: Wheat quality

Advancing wheat breeding through rapid marker-selectable trait introgression

The experimental research station in Toluca, Mexico. (Photo: S. Herrera/CIMMYT)

In the ever-evolving field of agriculture, AGG-WHEAT is leading a transformative approach through rapid marker-selectable trait introgression in wheat breeding programs. This method aims to streamline the process of integrating desirable traits into various genetic backgrounds.

At the core of AGG-WHEAT’s strategy is the establishment of a centralized marker-selectable trait introgression pipeline. This initiative seeks to facilitate the transfer of specific genes from a centralized source into various genetic backgrounds within plant breeding programs. Molecular markers play a crucial role in efficiently identifying and selecting target traits.

The merits of a centralized trait introgression pipeline extend beyond convenience. This approach ensures a more uniform and controlled transfer of genetic material, enhancing the precision of trait introgressions across diverse breeding lines. Molecular markers streamline the selection process, improving the accuracy of desired trait incorporation into wheat varieties.

Speed breeding facilities in Toluca, Mexico

AGG-WHEAT’s marker-selectable trait introgression pipelines are implemented at the speed breeding facilities located at the CIMMYT research station in Toluca, Mexico. These facilities serve as the incubators for innovation, where new selection candidates are evaluated based on various criteria. The decision-making process involves an expert panel comprising geneticists, trait specialists, and breeders. This panel annually determines the selection candidates, considering factors such as trait demand, genetic diversity, evidence of Quantitative Trait Loci (QTL) effects, selection efficiency, and available funding.

The decision-making process involves a multifaceted evaluation of potential selection candidates. Documented trait pipelines and product profiles guide decision-making to ensure alignment with the overarching goals of wheat breeding programs. Considerations include the need for phenotypic variation and the existence of limited genetic diversity for the trait under consideration.

The decision-making process also explores existing in-house or external evidence of QTL effects and the underlying gene mechanisms. Selection efficiency, contingent on the availability of accurate molecular markers and a known purified donor parent, further refines the pool of potential candidates. Established phenotypic protocols for product testing and the crucial element of available funding complete the decision-making criteria.

Achievements

In a significant step towards innovation, the products of the first marker-selectable trait introgression pipelines entered yield trials in 2023. This marks a transition from conceptualization to tangible impact, reflecting the efficacy of AGG-WHEAT’s approach. A total of 97 F5-lines, cultivated through the marker-assisted backcross (MABC) scheme, now grace the fields.

These lines carry novel genes associated with fusarium head blight and rust resistance, derived from wheat genetic resources and wild relatives. The choice of these traits underscores AGG-WHEAT’s commitment to addressing challenges faced by wheat crops, ensuring improved resilience and sustainability in the face of evolving environmental conditions.

The success of these initial trait introgression pipelines represents more than a scientific achievement; it marks a pivotal moment in the trajectory of wheat breeding. The 97 F5-lines, standing as testaments to enhanced resistance traits, are poised to make a transition into mainstream breeding pipelines. This marks the commencement of a broader dissemination strategy, where these lines will be distributed for testing at National Agricultural Research and Extension Services (NARES).

The journey from the experimental fields to mainstream adoption involves a meticulous process. These lines, having undergone rigorous evaluation and selection, now hold the potential to catalyze changes in commercial wheat varieties. The lessons learned from their cultivation will shape future breeding strategies and contribute to the resilience of wheat crops in diverse agricultural landscapes.

Rapid marker table. (Photo: CIMMYT)

AGG-WHEAT’s lasting impact

AGG-WHEAT’s marker-selectable trait introgression stands as an innovative approach in wheat breeding. The centralized approach, the strategic use of molecular markers, and the meticulous decision-making process exemplify the commitment to excellence and precision. The journey from concept to reality—marked by the entry of 97 F5-lines into yield trials—signals a new era in wheat breeding.

As these lines traverse from experimental fields to mainstream adoption, they carry the promise of transforming the landscape of commercial wheat varieties. AGG-WHEAT’s lasting impact goes beyond the scientific realm; it extends to the fields where farmers strive for sustainable and resilient wheat crops. In the tapestry of agricultural progress, AGG-WHEAT has woven a thread of innovation that holds the potential to redefine the future of wheat cultivation.

Enhancing wheat breeding efficiency in South Asia through early germplasm access

Wheat field. (Photo: CGIAR)

In the dynamic landscape of wheat breeding, early access to germplasm emerges as a strategic catalyst for accelerating variety turnover and meeting the evolving challenges faced by farmers in South Asia. Since its inception, the Accelerating Genetic Gains in Maize and Wheat (AGG) project has pioneered new tools to optimize the wheat breeding process. One such tool, the efficient and low-cost 3-year breeding cycle, has been fine-tuned in Mexico, using the Toluca screenhouse and field advancement in ObregĂłn, laying the groundwork for faster variety turnover.

The inaugural set of lines generated through this enhanced breeding cycle is already undergoing Stage 1 trials in the ObregĂłn 2023-24 season. However, the innovation doesn’t stop there; to expedite the variety release process and garner robust data from the Target Population of Environments (TPE), Stage 2 lines are being rigorously tested at over 20 sites in South Asia through collaboration with National Agricultural Research and Extension Services (NARES) partners. In the seasons spanning 2021-2024, a total of 918 Stage 2 lines underwent rigorous trials, aiming to provide early access to improved wheat lines for testing and release by NARES and establish a genetic correlation matrix between ObregĂłn selection environments and diverse sites across South Asia.

These extensive trials serve a dual purpose. Firstly, they facilitate early access to improved wheat lines for testing and release by NARES, bolstering the agricultural landscape with resilient and high-yielding varieties. Secondly, they contribute to the establishment of a genetic correlation matrix between the selection environments in ObregĂłn and the diverse sites across South Asia. This matrix becomes a guiding compass, aiding in selecting the most promising lines for broader TPEs in South Asia and beyond.

Transformative impact on wheat varieties in South Asia

Through the support of our partners and funders from the Bill & Melinda Gates Foundation, the Foundation for Food and Agriculture Research (FFAR), the UK Foreign, Commonwealth & Development Office (FCDO), and the US Agency for International Development (USAID), great achievements have been recorded throughout the region. India, a prominent player in wheat cultivation, stands as a testament to the transformative impact of early access to advanced lines. The top three varieties, namely DBW187, DBW303, and DBW 222, covering over 6 million hectares, trace their roots to CIMMYT varieties. Adopting a fast-track approach through early-stage testing of these advanced lines at BISA sites in India, supported by the Delivering Genetic Gain in Wheat (DGGW) project, facilitated the release of these varieties two years ahead of the regular testing process. This expedited varietal release was complemented by the innovative early seed multiplication and dissemination approach introduced by the Indian Council of Agricultural Research (ICAR). Recent additions to this accelerated channel include varieties such as DBW 327, DBW 332, DBW 370, and 371, promising further advancements in wheat cultivation.

Pakistan

In Pakistan, the early access to advanced lines has been a catalyst for releasing high-yielding, climate-resilient, and nutritious wheat varieties. In 2023 alone, 12 new varieties were released, with the renowned ‘Akbar-19,’ introduced in 2019, covering a substantial 42% of cultivated land in Punjab. Data released by the Ayub Agricultural Research Institute (AARI), shows that this variety, known for its high yield potential, disease resistance, and enriched zinc content, has significantly contributed to increased wheat production in the region.

Nepal

Guided by policy interventions in the national varietal testing process, Nepal has experienced the fast-track commercialization of high-yielding and climate-resilient wheat varieties. Allowing multilocation testing of CIMMYT nurseries and advanced elite lines, Nepal released six biofortified zinc wheat varieties in 2020. The expeditious seed multiplication of these released and pre-release varieties has facilitated the rapid spread of new and improved wheat varieties.

The strategic utilization of early access to wheat germplasm in South Asia holds promise in accelerating variety turnover, offering farmers resilient and high-performing wheat varieties. Collaborative efforts between research institutions, government bodies, and international organizations exemplify the power of innovation in transforming agriculture. With an ongoing dedication to refining breeding cycles, expanding testing initiatives, and fostering collaboration, the AGG project contributes to building a sustainable and resilient agricultural future in South Asia. Early access to wheat germplasm emerges as a practical approach in this scientific endeavor, laying the foundation for a climate-resilient and food-secure region. The successes witnessed in India, Pakistan, and Nepal underscore the transformative potential of this approach, offering tangible benefits for agricultural communities in South Asia and beyond. In navigating the complexities of a changing climate and growing food demand, early access to wheat germplasm remains a pragmatic ally, propelling agricultural innovation and resilience to new heights.

Discovering the potential of multispectral UAV and satellite sensors in detecting wheat rust in Ethiopia

Latest advances in sensor technology and data processing allow early detection, mapping and monitoring of crop infestation, helping prevent large-scale outbreaks.

A recent study published in Nature Scientific Reports, assesses the capability of very high-resolution satellite (VHRS) imagery and high-resolution unmanned aerial vehicles (UAVs) imagery for high-throughput phenotyping and detecting impacts of wheat rusts in earlier crop growth stages. UAVs and VHRS offer high potential for nonintrusive, extensive, rapid and flexible measurements of plant biophysical properties at very high spatial and temporal scales.

The study—led by CIMMYT in partnership with the Ethiopian Institute of Agricultural Research (EIAR) and Lincoln Agritech Ltd from New Zealand—establishes that these advanced sensor technologies are emerging as gamechangers in crop health management. They save time, complement traditional disease scoring methods and field surveys, and are cost-effective.

Further, the study establishes that multispectral VHRS sensors can pave the way for the upscaling of disease severity assessment from plot to regional scales at early growth stages.

Wheat rust is a global challenge

Globally, crop infections are an increasing threat to crop production and food security. Increased cross-border trade and travel, coupled with a changing climate are resulting in increased frequency and severity of crop disease outbreaks. Of all the diseases that affect wheat, wheat rusts are among the most damaging, capable of causing epidemics on a vast scale with significant economic and production losses. As of date, global losses from wheat rusts equate to 15 million tonnes per year (USD $2.9 billion). In Ethiopia, a major stripe/yellow-rust epidemic in 2010 affected an estimated 600,000 hectares, resulting in production losses of 15–20% and causing economic losses of USD $250 million. Similarly, a stem/black rust (SR) epidemic from 2013-2014 infected approximately 40,000 hectares. SR, which can cause 100% crop loss within weeks, is re-emerging as a major concern to wheat production.

Early detection, monitoring and timely intervention is key

Rapid early-season detection, monitoring and timely control of wheat rusts in susceptible varieties are critical to avoid large-scale outbreaks, especially in countries where fungicides are scarcely available or too costly for smallholders. UAV-based high-throughput phenotyping (HTP) has been recently investigated to support wheat improvement breeding, in particular, to assess plant growth development, canopy architecture, physiology, reaction to abiotic stress, crop disease and insect pest response, and wheat yield.

Figure 1

Spectral and thermal measurements at the plant and canopy levels allow for monitoring the interactions between plant germplasm and environmental (abiotic and biotic) factors. The current study identifies several spectral features from UAV and VHRS multispectral imagery that have strong assessment power for the detection of combined wheat rust diseases at early crop growth stages.

During a randomized trial conducted in Ethiopia, six bread wheat varieties with differing rust resistance were monitored using UAV and VHRS. In total, 18 spectral features were tested to assess stem and yellow rust disease progression and associated yield loss. Spectral properties of the wheat canopy (e.g., pigmentation, moisture, and biomass) are altered under rust disease stress. Using multispectral images and derived vegetation indices, it is possible to determine crop susceptibility to diseases and consequently can be used for detection and monitoring of wheat rusts.

Figure 2

Recent research on wheat, maize and dry bean demonstrated strong and significant correlations between vegetation indices extracted from UAV and VHRS imagery, confirming the feasibility of VHRS-HTP targeting biomass and yield; however, such satellite applications for plant breeding programs are still scarce.

Looking ahead to upscaling

This study provides valuable insight into the upscaling capability of multispectral sensors for disease detection from UAV imagery at 5 cm per pixel to pan-sharpened satellite imagery at 50 cm per pixel, demonstrating a first step towards upscaling disease detection from plot to regional scales. Further work will expand and improve current methodology to examine the VHRS detection capability towards machine and deep learning techniques (e.g., convolutional neural network) to allow for continuous monitoring systems, focusing on both single and mixed rust diseases under different treatments (e.g., variable fungicide rates, irrigation rates).

The early detection of diseases through spectral analysis and the integration of machine learning algorithms offers invaluable tools to mitigate the spread of infections and implement prompt disease management strategies.

Figures (1-2):

Field trial captured at varying spatial resolutions:

(a) SkySat false color composite (NIR-R-G) at 50 cm pixels (booting stage; 2020-10-17)

(b) UAV false color composite (NIR-R-G) at 5 cm pixels (heading stage; 2020-10-29) 

(Photo: Nature Scientific Reports)

Cream of the crop: Developing the next generation of wheat scientists is key to sustaining wheat production in Pakistan

On July 17-18, 2023, 87 wheat scientists gathered to learn about new approaches and methods for wheat improvement in Faisalabad, Pakistan. CIMMYT and the Wheat Research Institute, Faisalabad (WRI-FSD) jointly organized a two-day training. The course covered two topics: high throughput genotyping technologies and high throughput phenotyping platforms. The trainees, who were able to attend in person or remotely and 27% of whom were women, hailed from 17 NARES partners across Pakistan.

Trainees at Faisalabad, Pakistan. (Photo: CIMMYT)

After being welcomed by the Director General of Ayub Agricultural Research Institute (AARI), Akhtar Ali, and CIMMYT’s Country Representative, TP Tiwari, participants received an update on the status of wheat in Pakistan from Muhammad Sohail, national wheat coordinator for the Pakistan Agricultural Research Council (PARC). Subsequently, WRI-FSD Director, Javed Ahmed, discussed wheat research in Punjab, where over 70% wheat is grown in Pakistan. Kevin Pixley, interim director of CIMMYT’s Global Wheat Program, joined the proceedings remotely for a conversation about CIMMYT’s and CGIAR’s collaboration with NARES. Participants discussed the model’s successes, bottlenecks, the role of NARES, and the potential for capacity development. The conversation generated broad interest and suggestions for enhancing the partnership’s effectiveness. Akhtar Ali, Muhammad Sohail, and Javed Ahmed all spoke very highly about CIMMYT’s support in Pakistan.

This event was organized as part of a collaborative project entitled “Rapid development of climate resilient wheat varieties for South Asia using genomic selection” that is jointly managed by Kansas State University and CIMMYT with funding from the USAID Feed the Future program.

“Training emphasized the need for an output-oriented researcher that covered the development of climate-resilient wheat varieties, given the environmental challenges we are experiencing like, drought and heat, and highlighted the importance of innovative methodologies and advanced tools for high throughput phenotyping and genotyping for sustainable and resilient wheat production in Pakistan” said Muhammad Ishaq, a senior research officer and one of the training participants from Kohat Research Station, Khyber Pakhtunkhwa.

At the conclusion of the training, Javed, direct of WRI Faisalabad, commended CIMMYT’s support and suggested continuing the pace of training. Dr. Tiwari stressed the importance of such efforts will help Pakistan’s scientists develop and deploy climate resilient, impactful wheat varieties to boost wheat production and reduce wheat imports in the country.

Country moving forward from wheat importer to self-sufficiency

Wheat is critical to millions of households in Pakistan as it serves a dual role as a foundational part of nutritional security and as an important part of the country’s economy. Pakistan’s goal to achieve self-sufficiency in wheat production is more attainable with the release of 31 wheat varieties since 2021.

These new seeds will help the country’s 9 million hectares of cultivated wheat fields become more productive, climate resilient, and disease resistant—a welcome development in a region where climate change scenarios threaten sustained wheat production.

The varieties, a selection of 30 bread wheat and 1 durum wheat, 26 of which developed from wheat germplasm provided by the International Maize and Wheat Improvement Center (CIMMYT) were selected after rigorous testing of international nurseries and field trials by partners across Pakistan. During this period, three bread wheat varieties were also developed from local breeding programs and two varieties (one each of durum and bread wheat) were also developed from the germplasm provided by the ICARDA. These efforts are moving Pakistan closer to its goal of improving food and nutrition security through wheat production, as outlined in the Pakistan Vision 2025 and Vision for Agriculture 2030.

Harvesting wheat in Tandojam, Pakistan (Photo: CIMMYT)

Over multiple years and locations, the new varieties have exhibited a yield potential of 5-20% higher than current popular varieties for their respective regions and also feature excellent grain quality and attainable yields of over seven tons per hectare.

The new crop of varieties exhibit impressive resistance to leaf and yellow rusts, compatibility with wheat-rice and wheat-cotton farming systems, and resilience to stressors such as drought and heat.

Battling malnutrition

Malnutrition is rampant in Pakistan and the release of biofortified wheat varieties with higher zinc content will help mitigate its deleterious effects, especially among children and women. Akbar-2019, a biofortified variety released in 2019, is now cultivated on nearly 3.25 million hectares. Farmers like Akbar-2019 because of its 8-10% higher yields, rust resistance, and consumers report its good chapati (an unleavened flatbread) quality.

“It is gratifying seeing these new varieties resulting from collaborative projects between Pakistani wheat breeding programs and CIMMYT along with funding support from various donors (USAID, Bill & Melinda Gates Foundation, HarvestPlus, and FCDO) and the government of Pakistan,” said Ravi Singh, wheat expert and senior advisor.

Closing the yield gap between research fields and smallholder fields

Releasing a new variety is only the first step in changing the course of Pakistan’s wheat crop. The next step is delivering these new, quality seeds to markets quickly so farmers can realize the benefits as soon as possible.

Increasing evidence suggests the public sector cannot disseminate enough seeds alone; new policies must create an attractive environment for private sector partners and entrepreneurs.

Field monitoring wheat fields (Photo: CIMMYT)

“Pakistan has developed a fast-track seed multiplication program which engages both public and private sectors so the new varieties can be provided to seed companies for multiplication and provided to farmers in the shortest time,” said Javed Ahmad, Wheat Research Institute chief scientist.

Strengthening and diversifying seed production of newly released varieties can be done by decentralizing seed marketing and distribution systems and engaging both public and private sector actors. Marketing and training efforts need to be improved for women, who are mostly responsible for household level seed production and seed care.

A concerted effort to disseminate the improved seed is required, along with implementing conservation agriculture based sustainable intensification, to help Pakistan’s journey to self-sufficiency in wheat production.

Increasing yield gain in Afghanistan

Faced with climate change and having to keep pace in the race to feed the world’s growing population, farmers of staple crops like wheat are under pressure to constantly increase yield per hectare.

Increasing yield gains is especially important in Afghanistan, where per capita consumption of wheat is nearly three times more than the global average and wheat accounts for up to 60% of daily caloric intake of the average Afghan citizen.

The International Maize and Wheat Improvement Center (CIMMYT) develops and distributes improved seed targeted toward diverse wheat growing regions in the developing world, including Afghanistan, a net importer of wheat. A study by CIMMYT scientists, published in Crop Science, measured yield gain and improvement in a variety of traits of CIMMYT developed varieties compared against local wheat, over a 14-year period. The results showed the CIMMYT varieties confer yield gains, contributing to an increase in Afghanistan’s wheat productivity.

In terms of yield, the CIMMYT varieties showed an increase of 123 kilograms per hectare (kg/ha) over the time interval studied, compared to 107 kg/ha for local varieties.

“This study shows continual increases in yield from CIMMYT varieties across Afghanistan,” said lead author Rajiv Sharma. “This shows the potential of genetically improved germplasm to increase yields, strengthen resistance to diseases and improve other important traits.”

Researchers also examined specific traits, like days to heading and overall plant height. Days to heading refers to the number of days from planting to when the plant is ready to be harvested and overall plant height is the highest measurement a plant reaches. This is important because if a wheat plant grows too high, it will lodge (fall over) under its own weight, rendering it non-harvestable.

Across the CIMMYT varieties there was a 1.8 day per year reduction in days to heading. This is a positive sign for Afghan wheat production as research has shown that crop durations will be reduced because of climate-associated stresses. Shorter crop duration also reduces the cost of crop production, since shorter crop duration reduces the requirements for water, labor, fertilizer, and other resources.

In terms of plant height, the CIMMTY varieties showed a gain of 0.77 cm per year. Although a negative correlation between plant height and grain yield has been reported in other studies, this is not the case in Afghanistan. Increased plant height is often an indicator of higher biomass (the amount of aboveground volume including leaves and stems which might fall to the ground) which drives higher yield, provided the plant does not lodge. Higher biomass is also required in many developing countries, including Afghanistan, to produce straw that is used dry fodder feed for livestock. This appears to result from selections to increase overall production, mitigate negative impacts and fulfil the changing preference of farmers.

“This kind of evaluation is important in determining the efficacy of CIMMYT’s efforts to provide  improved wheat varieties tailored to diverse production environments around the world,” said Alison Bentley, co-author of the study and director of CIMMYT’s Global Wheat Program. “It also makes a strong case for continued investment in plant breeding and for the collaboration between Afghanistan and CIMMYT.”

Read the study: Plant breeding increases spring wheat yield potential in Afghanistan

Cover photo: Farmers working in a field in the Shibar Valley in Bamian province, Afghanistan. (Adam Ferguson/The New York Times)

The future of wheat

CIMMYT’s experimental station in Obregón, a small city in Mexico’s state of Sonora, is considered a mecca for wheat research and breeding. In 1945, Norman Borlaug arrived as a geneticist for a special project between the Mexican government and the Rockefeller Foundation, to help local farmers with wheat production. After a few years, his strong bond with the community, students and interns was key to making a remarkable difference on wheat research that save millions from famine and won him the Nobel Peace Prize. A legacy that has lasted for many decades.

At Obregón, scientists have access to state-of-the-art field facilities and an ideal location, in the northern Yaqui Valley. The station’s dry climate and favorable temperature in winter is suitable to assess yield potential, while its hot summers are ideal to study wheat’s tolerance to different stressors.

Here, scientists and field workers work hard all year round to ensure the future of wheat. Varieties grown in all continents have CIMMYT and Sonoran DNA.

SPECIAL THANKS TO: Jeanie Borlaug Laube. JesĂșs Larraguibel Artola, President of PIEAES (Patronato para la InvestigaciĂłn y ExperimentaciĂłn AgrĂ­cola del Estado de Sonora A.C.). AsociaciĂłn de Organismos de Agricultores del Sur de Sonora A.C. (AOASS) Global Wheat Program, CIMMYT: Alison Bentley (Program Director), Karim Ammar, Rodrigo RascĂłn, Carolina Rivera, Alberto Mendoza, Leonardo Crespo and Nele Verhulst.

CREDITS: Production: Alfonso Cortés, Marta Millere and Silvia Rico, CIMMYT. Additional drone shots: Courtesy of INIFAP and PIEAES. Post-production: Silvia Rico, CIMMYT

MUSIC: The Way Up created by Evert Z. Licensed from Artlist.io (License owner: CIMMYT. Creator Pro License Number – 159864). Eclipse created by EFGR. Licensed from Artlist.io (License owner: CIMMYT. Creator Pro License Number – 159864).

A Chinese Wheat Breeder’s International Vision

China is the largest global producer and consumer of wheat. The country’s breeders are developing high quality, high yield varieties, with resistance to the droughts and crop blights that have increased in frequency and spread due to climate change.

He Zhonghu, a research fellow with the Institute of Crop Sciences under the Chinese Academy of Agricultural Sciences (CAAS), is passionate about the power of international exchanges and cooperation for fueling agricultural development.

He is also director of the China office for the International Maize and Wheat Improvement Center (CIMMYT), introducing 20,000 samples of wheat seed sources to more than 25 institutions and contributing to the breeding of more than 80 new varieties.

Read more: A Chinese Wheat Breeder’s International Vision

Exploring the potential for blended wheat flours in Kenya  

Over the years, wheat-based foods have increasingly been incorporated as part of Kenyan meals. One example is packaged bread, which has become a common feature on Kenyan breakfast tables with millions of loaves from industrial bakeries delivered to retail shops daily, countrywide. Another example is chapati — a round unleavened flat bread. Once reserved for special occasions, chapati can now be purchased from roadside venders throughout the capital Nairobi.

Millers and processors in Kenya are highly dependent on imported wheat to meet the strong demand for wheat-based food products. The conflict between Russia and Ukraine, two of the most important sources of imported wheat for Kenya, presents a major threat to millers and industrial bakeries.  Prices for bread and chapati are increasing and may continue to increase. Governments and wheat-related industries are looking at short- and long-term options to reduce utilization of imported wheat. One short-term option is the blending of wheat flour with flour derived from locally available crops, such as cassava, millet or sorghum.

Record-high price of wheat

A sign at a flour mill in East Africa shows proportions of wheat from different origins (Argentina, Russia, Ukraine and local) used in that particular day’s production. (Photo: Alison Bentley/CIMMYT)
A sign at a flour mill in East Africa shows proportions of wheat from different origins (Argentina, Russia, Ukraine and local) used in that particular day’s production. (Photo: Alison Bentley/CIMMYT)

A visit to local industrial bakeries and wheat flour millers on the outskirts of Nairobi by International Maize and Wheat Improvement Center (CIMMYT) researchers confirmed the effects of record-high global prices of wheat.  Global Wheat Program director Alison Bentley and senior economist Jason Donovan had conversations with leaders of industrial bakeries and millers, who gave insights into their grain demands, production processes and sales volumes.

One of the leaders of an established industrial bakery divulged that they use approximately 15,000 tons of wheat flour monthly to make baked products, with only 10% of the wheat obtained locally.

“In the last ten years, local wheat production has comprised about ten to fifteen percent of our cereal mixture for bread, and we were already paying higher prices to farmers compared to import prices. The farmers were already being paid about 30 to 40 dollars more per ton,” a manager of a large baking industry in Kenya explained to the CIMMYT team.

According to government regulations, millers and bakeries must purchase locally produced wheat at agreed prices before they can buy imported wheat. He agreed that though the quality of local wheat is good, the local production cannot compete with the higher volume of imported wheat or its lower price.

Growing wheat in East Africa

It has been more than four months since the Russia-Ukraine conflict unfolded, and since then prices of wheat-based products have been increasing significantly. The current crisis has sparked the debate on low levels of self-sufficiency in food production for many countries. And this is especially the case for wheat in Kenya, and more widely in Africa.

Bentley points out that the biophysical conditions to produce wheat in East Africa are present and favorable. However, more work is needed to strengthen local wheat production, starting with efficient seed systems. Farmers who are interested in growing wheat need access to high performing and stress-tolerant wheat varieties.

CIMMYT Global Wheat Program director, Alison Bentley, observes the bread making process at an industrial bakery on the outskirts of Nairobi, Kenya. (Photo: Susan Otieno/CIMMYT)
CIMMYT Global Wheat Program director, Alison Bentley, observes the bread making process at an industrial bakery on the outskirts of Nairobi, Kenya. (Photo: Susan Otieno/CIMMYT)

Practical response to the crisis

With no certainty as to how long the conflict will continue and climate change resulting in significant crop loss in key production zones, wheat shortages on international markets could become a reality. Blending of wheat flour with locally available crops could be an option as an immediate response to the current scarcity of wheat in East Africa. “Blending [flour] is when for instance five percent of wheat flour is replaced with flour from a different crop such as sorghum or cassava,” Bentley explained.

Donovan added that, though it might seem like a small number, it becomes significant in consideration to the volume of wheat that industries use to make different products, translating into thousands of metric tons. He noted that blending flour therefore has the potential to create a win-win situtation, because it can boost the demand for local crops and address uncertainty and price volatility on international wheat markets.

Consumer acceptance of new products

Different types of flour on supermarket shelves in Kenya. (Photo: Pieter Rutsaert/CIMMYT)
Different types of flour on supermarket shelves in Kenya. (Photo: Pieter Rutsaert/CIMMYT)

During a full week of engagements with universities, partners, and industry experts in Kenya, the CIMMYT team explored the current interest of the sector in blending wheat flour. Several partners agreed that this could be a potential way forward for the grain industry but all highlighted one key element: the importance of consumer acceptance. If the functionality of the flour or taste would be negatively influenced by blending wheat flour, it would represent a no-go from the industry, even if blends would have higher nutritional benefits or lower prices. “This reinforces the need to understand consumer preferences and evaluate both the functionality of the flour to produce essential food products such as chapati or bread as well as the taste of those products,” Pieter Rutsaert explained.

CIMMYT researchers Sarah Kariuki and Pieter Rutsaert, both Markets and Value Chain Specialists, and Maria Itria Ibba, Head of the Wheat Quality Lab, are therefore engaging with local millers and universities in Kenya to design bread and chapati products derived from different wheat blends, to include blends comprised of 5%, 15% and 20% of cassava or sorghum. Lab testing and preliminary consumer testing will be used to identify the most promising products. These products will be taken to the streets in urban and peri-urban Nairobi to assess consumer tastes and preferences, through sensory analysis and at-home testing.

The market intelligence gained will offer foundational support for CGIAR’s Seed Equal Initiative to accelerate the growth of a demand-driven seed system. By gathering and analyzing consumer preferences on selected crops for blending, such as from farmers and milling industries, Donovan pointed out that CGIAR breeding will continue to make informed choices and prioritize breeding for specific crops, that seek to address specific challenges, therefore having greater impact.

Donovan noted that data and information from the studies will provide much needed evidence and fill information gaps that will support governments, millers, processors and farmers to make decisions in response to the evolving wheat crisis.

Wheat improvement: Food security in a changing climate

This open-access textbook provides a comprehensive, up-to-date guide for students and practitioners wishing to access the key disciplines and principles of wheat breeding. Edited by Matthew Paul Reynolds, head of Wheat Physiology at CIMMYT, and Hans-Joachim Braun, former Director of CIMMYT’s Global Wheat Program, it covers all aspects of wheat improvement, from utilizing genetic resources to breeding and selection methods, data analysis, biotic and abiotic stress tolerance, yield potential, genomics, quality nutrition and processing, physiological pre-breeding, and seed production.

It will give readers a balanced perspective on proven breeding methods and emerging technologies. The content is rich in didactic material that considers the background to wheat improvement, current mainstream breeding approaches, translational research, and avant-garde technologies that enable breakthroughs in science to impact productivity, facilitating learning.

While the volume provides an overview for professionals interested in wheat, many of the ideas and methods presented are equally relevant to small grain cereals and crop improvement in general.

All chapter authors are world-class researchers and breeders whose expertise spans cutting-edge academic science to impacts in farmers’ fields.

Given the challenges currently faced by academia, industry, and national wheat programs to produce higher crop yields, often with fewer inputs and under increasingly harsher climates, this volume is a timely addition to their toolkit.

Multi-trait genomic-enabled prediction enhances accuracy in multi-year wheat breeding trials

A CIMMYT researcher and a field worker lay out wheat seed for planting at the center's headquarters in Texcoco, Mexico. In experimental trials, hundreds or thousands of wheat lines are planted for evaluation, each in small quantities, and so they are carefully laid out and sown by hand. (Photo: CIMMYT)
A CIMMYT researcher and a field worker lay out wheat seed for planting at the center’s headquarters in Texcoco, Mexico. In experimental trials, hundreds or thousands of wheat lines are planted for evaluation, each in small quantities, and so they are carefully laid out and sown by hand. (Photo: CIMMYT)

To help feed a growing world population, wheat scientists have turned to innovative technologies like genomic selection to hasten selection for positive traits — such as high grain yield performance and good grain quality — in varieties that are still undergoing testing. Instead of being shackled by the long duration of traditional breeding cycles, genomic selection allows scientists to make predictions regarding which traits will present when crossing two varieties; allowing breeders greater guidance and lessening potential time lost when crossing varieties that do not display potential for genetic gain. To reap the benefits of genomic selection, it is vital that the predictive models employed are as accurate as possible.

Currently, wheat breeders select characteristics like grain yield performance early in the breeding process, while selecting traits like good grain quality at a later stage in the breeding process.

In an article in the journal G3 Genes, researchers from the International Maize and Wheat Improvement Center (CIMMYT), and partners, led by CIMMYT scientist José Crossa along with Leonardo A. Crespo, Maria Itria Ibba and Alison R. Bentley, endeavored to determine if genomic prediction models could select for both characteristics simultaneously in the breeding process. This would improve selection accuracy in both early and later breeding stages, resulting a reduction in time and expense in delivering improved wheat varieties. They also tested the accuracy of a set of specific mathematical corrections applied to genomic predictions. These correction models identify correlations between genomic predictions and observed breeding values, such as increased yield or grain quality.

Considering two or more traits, like grain yield and good grain quality, is an example of a multi-trait model. The team examined this multi-trait model against a single trait model that improves one specific trait. Overall, the researchers found that prediction performance was highest using the multi-trait model.

However, the team also demonstrated that when breeding programs arrive at their genetic predictions, applying a specific correction method will account for differences between the predicted breeding value and the actual observed breeding value. Current correction models tend to underestimate that difference, which results in breeding programs not running as efficiently as possible.

By partnering selections from different stages in the breeding process and examining the resulting genetic predictions through a more appropriate correction model, the team has shown that breeding programs can use this to their benefit in developing and ultimately releasing improved wheat varieties that meet growing yield needs worldwide and respond to abiotic and biotic stressors.

The science behind the perfect bread and pasta flour

Have you ever considered that bread and pasta are made from different types of wheat? How about the fact that there are thousands of different wheat products consumed around the world, and each one has unique characteristics and processing requirements?

Scientists at the International Maize and Wheat Improvement Center (CIMMYT) understand that the quality of the final product, be it spaghetti, a loaf of sourdough bread or a tandoori naan, is highly dependent on the quality of the grain and the flour it becomes. Every year, CIMMYT analyzes thousands of wheat lines in detail at its Wheat Quality laboratory to determine the nutritional, processing and end-use quality of the grain. In this short video, CIMMYT’s Wheat Quality lab head Maria Itria Ibba explains exactly what they are looking for and how they find it.

First, CIMMYT scientists test the overall grain quality by analyzing grain weight, density, protein content, moisture content and hardness.

The grains are then milled into flour, which is again analyzed for moisture content, protein content, color and protein quality. Protein quality is especially important to determine the end-use for the type of flour, and CIMMYT conducts several tests to determine this characteristic. Bread and durum wheat flours specifically are analyzed for overall protein quality by checking SDS-sedimentation volume. Mixographs are used to assess the flour’s mixing and absorption characteristics, and alveographs are used to measure dough deformation properties.

At the end of the tests, bread wheat flours are transformed into leavened breads and scored based on the loaf’s volume and crumb quality. Durum wheat flour, used to make Italian-style pasta, is scored based on grain quality, flour yellowness, high protein content and protein quality.

CIMMYT’s work ensures that wheat-derived foods produced in developing countries are nutritious, affordable, and maximize profits for each actor in the value chain.

Cover photo: At CIMMYT’s Wheat Quality lab, researchers evaluate how different bread wheat varieties behave at the time of baking. (Photo: CIMMYT)

From science to impact: a chat with women scientists at CIMMYT

At the International Maize and Wheat Improvement Center (CIMMYT), staff are one of our most important assets. We anchor our commitment to diversity and inclusion through our vision, mission and organizational strategy. We interpret workplace diversity as understanding, accepting and valuing all aspects of one’s identity, including gender.

Scientists such as Itria Ibba, head of the Wheat Chemistry and Quality Laboratory, Thokozile (Thoko) Ndhlela, maize line development breeder, and Huihui Li, quantitative geneticist, empower the rest of the maize and wheat research community to do more for those who need sustainable food systems the most.

It wasn’t easy to find a convenient time for the four of us to have a conversation — me, because of COVID-19 travel restrictions, from the Netherlands, Itria in Mexico, Thoko in Zimbabwe and Huihui in China – but we managed. I enjoyed hearing about their work, what sparked — and continues to spark — their passion for maize and wheat research and had the chance to share some thoughts about where the CGIAR transition is taking us.

Martin Kropff, Itria Ibba, Thoko Ndhlela and Huihui Li share a discussion over Zoom. (Photo: CIMMYT)

Martin Kropff: Hello Itria, Huihui and Thoko, great to see you! I’d love to hear more about what you do. Why do you think your work is important in this day and age?

Itria Ibba: Hello Martin! I lead the [CIMMYT] Wheat Chemistry and Quality Laboratory. I am very passionate about my work, which I believe is very important.

In the lab we work both on the improvement of wheat technological and nutritional quality. Both of these aspects are fundamental for the successful adoption of a wheat variety and, of course, to promote a healthy and nutritious diet. Development of nutritious varieties is especially important because — especially in developing countries — the basic diet doesn’t provide all the micro and macronutrients necessary to live a healthy life. Since my focus is wheat, a staple crop that is mainly used for human consumption, I think the work that I am doing can actually have a direct and real impact on the lives of many people.

Kropff: It is important that you — on the quality side of the work — can give feedback to the breeders, and they listen to you. Is it happening?

Ibba: I believe that yes. Of course, quality cannot be the only target in the selection process where several other traits such as yield potential, disease resistance and tolerance to abiotic stresses have to be considered. However, especially for wheat, quality needs to be considered because it is strictly associated with the economic value of a specific variety and plays a fundamental role throughout the whole wheat value chain. The feedback we are giving is being taken positively. Of course, it could be ‘heard’ more.

Kropff: If I may ask, do you think you’re being treated as a scientist regardless of your gender? Or does it matter?

Ibba: Personally, I have always felt that I was respected, in my lab and in my team, especially at CIMMYT. At the beginning, I had some concerns because I am a bit young
 Mainly because of that, yes, but not because I am a woman. I cannot say anything bad from that perspective.

Kropff: I think that young people must have the future in our organization. Sometimes when people get older — I try not to be like that, but I am also getting older — they think that they know everything and then you have to be very careful, because the innovations are mostly coming from young people. But young minds come up with new ideas. What about your work, Huihui? You are contributing in a completely different way than Itria and Thoko, and you are coming from a mathematical point of view. When I see you, I always think about math.

Li: Yes, due to my major, sometimes I feel like I am a stranger working in an agricultural research organization. Because I can’t breed new varieties, for example. So, what’s my position? I ask myself: how can I have a successful career in agriculture? But I think that in this new era, this new digital era, I can do more.

Kropff: Data, data, data!

Li: Yes! We can do smart agriculture based on big data. We can do a lot of things with prediction, so that breeders can save time and effort. Maybe we cannot breed the varieties directly or we cannot publish our new findings in high impact journals, but we can play an essential role for this work to be successful. I think that’s my added value: to be useful to breeders.

Kropff: And you are! Thoko, what about you?

Ndhlela: I’m a maize breeder. I’m responsible for two product profiles in southern Africa and these are extra early, early and nutritious maize. I feel like my work is very important, given that I am focusing on developing and deploying nutritious and stress-tolerant maize varieties to people who rely on maize as a staple food crop. White maize is the one that is mainly consumed and yet it doesn’t contain any of the micronutrients such as vitamin A, zinc, iron. We are working towards closing that gap where people have limited or no access to other foods that contain those micronutrients. If we provide them with maize that is nutritious, then we close that gap and addressing the issue of malnutrition. It is especially critical, for young children. According to UNICEF, 53% of the mortalities in children globally are due to micronutrient deficiencies. My work aims to address to a greater extent the problems that farmers face.

Thoko Ndhlela presents on provitamin A maize at a CIMMYT demonstration plot in Zimbabwe. (Photo: CIMMYT)

Kropff: Are you working on provitamin A maize?

Ndhlela: Yes!

Kropff: It’s orange right? How are consumers adopting it? Does that require extra marketing activities?

Ndhlela: Yes, because in most countries where maize is a popular staple food, people use yellow maize mostly for livestock feeds. But when it comes to the main food, they mainly use white maize. So there has to be that extra effort. We have been working with HarvestPlus on that front, and so far in southern Africa we’ve made good strides in terms of getting people to accept the maize.

Back in the day, when they were first introduced to the idea of eating yellow maize as main food, that maize came from food relief and not in a good state, so there was that negative attitude, which they remembered when we came in with vitamin A maize [which has a yellow color]. We told them, “This is different” and the fact that we did demos, they grew the maize, they harvested and consumed it, led to their acceptance of it. Right now, we have so much demand for seed, especially across southern Africa. Seed companies that we work with say that the seed is sold out and people are still looking for it.

Kropff: I’m very happy to hear this. We have to make sure that what we do is demand-driven, right? And on your role as a woman in research in Zimbabwe. Do you feel like you are taken seriously as a scientist?

Ndhlela: I really do, yes. I am really given space to be myself, to do my work and have that impact on the ground.

Ibba: Martin, I have a question regarding One CGIAR. Will there be any changes within CIMMYT regarding redistribution of research areas? Will some of the research areas change the research focus or implement new research groups and strategies?

Kropff: I could talk for five hours about this. CGIAR has big plans to change the structure, to change the initiatives, to change everything this year.
I believe that CIMMYT is strong, we have a lot of impact. The quality of our work is really high, and I want to make sure that CIMMYT’s work — your work — finds a solid landing in the new CGIAR.

They’re envisioning a restructuring in three large science groups. Several Directors General suggest that we shouldn’t start breaking everything up but that we take whole programs as we have them now and bring them into the new science groups. It’s complicated but everyone wants the CGIAR to be successful.

In terms of research, what we do as CIMMYT already provides solutions, for example, the Integrated Development Programs, such as CSISA, MasAgro, SIMLESA. This has now been taken over by the whole CGIAR. These are programs where you work with national systems and you look at what is important to them, and where innovation is needed. Not focusing on single solutions but integrated solutions from different disciplines. When the research needs come directly from the stakeholders, we become more demand-driven. And that makes life even more exciting.

I think that when we listen to our stakeholders, there will always be a maize and wheat component [in agricultural research]. When we interviewed them in 2020, they stated that things [that are on top of their wish list for agricultural research and development are] breeding, agronomy, big data, and wheat, maize and rice.

I always say: what we need is food systems that deliver affordable — you said it already, Thoko — sufficient and healthy diets produced within planetary boundaries. And for all those criteria, wheat and maize are key because they are efficient, they are produced very well, they provide a good basis of nutrition, and you can produce them within planetary boundaries.

But, back to you. Could you share a story or anecdote about a turning point or defining moment in your work?

Ibba: Personally, I’ve had different turning points that led me to this career but I believe that one of the most important moments for me was when I started my PhD in Crop Science at Washington State University. There for the first time in my scientific career I understood the importance of working together with breeders, molecular scientists, cereal chemists and even with food companies in order to deliver a successful product from farmers all the way to consumers. The research done there had a real impact that you could see and I loved it. Also for this reason, I am happy to now work at CIMMYT because this happens here, as well, but at a bigger scale. You can clearly see that the work and research you do are directly used and go into new wheat lines and new varieties which are grown by different farmers across the world. It’s amazing. That’s what I think had a bigger impact for me.

Itria Ibba presenting on wheat quality in her lab at CIMMYT HQ, Mexico. (Photo: CIMMYT)

Ndhlela: I think the biggest moment in my work was when I was first employed as a scientist at CIMMYT. I always looked at CIMMYT scientists as role models. I remember many times that CIMMYT jobs were being advertised for technicians, and people would say, “Oh, this is yours now!” and I told them, “No, no, no, I will only join CIMMYT as a scientist.” And I waited for that moment. And it came and was a turning point in my career and I really thought that now I can express myself, do my work without limitations. And to reach impact!

Another great moment in my work is when I hear that hundreds of farmers are growing and consuming the varieties that I am involved in developing and deploying. I really want to hear people talking of impact: how many tons of certified seed is being channeled from seed companies to the growers, and how many peoples’ lives are we improving. I think that really defines my work. If the varieties don’t get to the farmer, then it is just work going to waste.

Li: Sometimes I feel inferior because I can’t breed a variety, or have big papers in agriculture-related journals, but one day I looked up my citation of my publications and I felt self-satisfied. I could feel my impact. Actually, several of my papers are highly cited; my total citation is more than 3,000 right now.

Kropff: Oh good!

Li: Yes! That means that my work has impact and many people are using the algorithm I developed to have even more impact. Papers that cite my work are published in Science and Nature, Nature Genetics, etc. I feel useful and like my work plays an essential role in research.

Kropff: That’s the thing: there’s impact in science and impact in farmers’ fields and at CIMMYT it comes together. Colleagues at CIMMYT are taking your results and using them to make a difference through crop variety improvement and other things.

Ndhlela: How do you think that One CGIAR will help strengthen our research towards the Sustainable Development Goals across the geographies where we work?

Kropff: I have always promoted the idea of ‘One CGIAR’. Even before joining CIMMYT. But it is complicated because we’re bringing 13 CGIAR Centers together. I saw it at Wageningen University: when you have one organization, you can be so much stronger and more visible, globally.

Because together we [One CGIAR] are the global international organization for agricultural research. We add something [to our global partners such as] the Food and Agriculture Organization of the UN (FAO) which works on agricultural policy, and IFAD that has international development programs and World Food Programme which delivers food — most of it staple crops — to those who need it the most. But supplying food is not a sustainable approach, we want to have sustainable food systems in those countries, so that people can produce their own food. That’s where research is necessary, and knowledge is necessary.

I am super proud that the wheat and maize and agronomy work we do is so well adopted. Farmers are adopting our varieties across the globe. These are new varieties I’m talking about — this is key — which are on average 10 years old and they respond to current challenges happening on the ground. Regarding your work, Thoko, with maize, I just got data from Prasanna [CIMMYT’s Maize Program and CGIAR Research Program on Maize Leader, Prasanna Boddupalli] that farmers are growing drought-tolerant maize and other maize varieties from CIMMYT on 5 million hectares in eastern and southern Africa! All of this is because of a good seed systems approach with the private sector: small seed companies delivering our varieties scaling our great breeding work. Taking it to the farmers!

I think that the work that we do is super important to reach the Sustainable Development Goals. Number one —– well, it’s number two, but for me it is the first —– is ending hunger. Because when you’re hungry, you cannot think or live normally. Poverty is also an incredibly important challenge. But I would put hunger as number one. I don’t think any of us here have had real hunger. My parents did, in the Second World War and let me tell you, when I heard those stories, I realized that that’s something that nobody should go through.

Climate change as well. We have to keep innovating because the climate keeps changing. I was just reading today in a Dutch newspaper that 2 degrees won’t be reached, it will be more. And in the Netherlands the land is so low, so that even with dykes, we will not be able to manage in the next 50 years. People will have to start moving. In the Indo-Gangetic Plains, they’ll have to plant short duration rice, use smart machinery such as the Happy Seeder, then plant short duration wheat — all just to stay ahead of the looming 50 ˚C weather.

Do you agree?

Ibba: Well, yes, but I hope that in the end there will be good coordination between the CGIAR Centers and everything. But if it works well, then I definitely think that it will be more impactful. That’s for sure.

Kropff: What can supervisors and mentors do to encourage women in science careers?

Li: I think this is a good question Martin. I am sure that Itria and Thoko will agree with me: women need more than just our salary. I think that women are more emotional, so, most of the time, when my supervisor is more considerate and careful in regard to my emotions, I feel touched and actually, more motivated. I simply need more consideration, emotionally. I have some experience in this with students [who work for me]. When I want to stimulate their motivation, I compare the two effects. Say, I increase their salary. I feel that the male student is happier than the female. [Laughs] On the other hand, I try to be more considerate with all of my students and ask them about their families or express concern about something. When I do this, I don’t get much of a reaction from the males but the females are grateful. I think the same works for me.

Huihui Li at work in her lab in China. (Photo: CIMMYT)

Kropff: I always intend to treat everyone equally and I think I do. But then some people need to be treated differently. That is situational management based on the capabilities and also the personality of people. Do we have to be more mindful of how one works with women?

Li: Well, people are diverse.

Kropff: Right. On the one hand, people should be treated as they want to be treated based on their individual personality, and then on the other hand you want to make sure that women are taken as seriously as men in, say, science.

Ndhlela: I agree with Huihui. Supervisors should give maximum support to women because they already have full plates. The field of science is challenging, so if they feel that they’re not being given enough support, they tend to get discouraged and demoralized. So, supervisors and colleagues need to take that into account. Like Huihui said, women are more emotional than our counterparts. And they need that support. When dealing with women in a professional setting, supervisors could take a visionary style where they give us space to work and do our assigned duties without a lot of interference. Micromanagement is frustrating. From my experience, women in science are serious and they can work with minimum supervision and they are really out there to achieve objectives.

Ibba: I agree with both of you. Space and trust, and constructive criticism. Apart from the strength and support from one’s supervisor, it would be good to implement a mentorship program for young scientists. Sometimes you need a non-supervisor voice or someone that can guide you [who you do not report to]. Human Resources also need to play a key role in supporting women and men, and ensuring zero discrimination. But I’m sure that all we really want is to be treated as humans [laughs]. We all have emotions.

Kropff: Thank you very much colleagues for this open discussion. This has been very interesting and given me a lot of food for thought. Our conversation makes me miss pre-COVID-19 informal moments at work and at conferences, social moments where people open up. But here we show, we can do that during Zoom meetings as well with videos on to read each other’s body language and with groups that are small. Thank you for the inspiration!

The Cereal Serial: What are whole grains and why do they matter?

In the first installment of The Cereal Serial, CIMMYT’s maize and wheat quality experts Natalia Palacios and Itria Ibba explain what whole grains are and why they are an important part of a healthy diet. For a deeper dive into the subject, check out our whole grains explainer.

Share recipes and photos of your favorite whole grain foods by tagging @CIMMYT and using #choosewholegrains in your social media posts.