Researchers and experts from 15 countries convened in Zambia, between 4-15 March 2024, for an international training on wheat blast disease screening, surveillance, and management.
Wheat blast, caused by pathogen Magnaporthe oryzae pathotype triticum, is threatening global wheat production especially in warmer and humid regions. The disease was ïŹrst observed in Parana state of Brazil in 1985 and subsequently spread to Bolivia, Paraguay, and Argentina. Outside of South America, wheat blast incidences were recorded for the first time in Bangladesh in 2016 and in Zambian wheat fields in 2018.
To mitigate the impact of this potential plant pandemic, the Zambia Agriculture Research Institute (ZARI), in collaboration with CIMMYT and other partners, organized a comprehensive training for building research capacity and raising awareness within the local and international community, especially in at-risk countries.
âThis collaborative effort, supported by various international partners and funders, underscores the importance of global cooperation in addressing agricultural challenges such as wheat blast. The objective of the training was to empower researchers with knowledge and tools for enhanced wheat production resilience in regions vulnerable to this destructive disease,â said Pawan Kumar Singh, principal scientist and project leader at CIMMYT. Singh collaborated with Batiseba Tembo, wheat breeder at ZARI-Zambia, to coordinate and lead the training program.
Thirty-eight wheat scientists, researchers, professors, policymakers, and extension agents from countries including Bangladesh, Brazil, Ethiopia, India, Kenya, Mexico, Nepal, South Africa, Sweden, Tanzania, United Kingdom, Uruguay, Zambia, and Zimbabwe convened at the Mt. Makulu Central Research Station in Chilanga, Zambia.
âWheat blast is a devastating disease that requires concerted efforts to effectively manage it and halt further spread. The disease is new to Africa, so developing capacity amongst country partners before the disease spreads more widely is critical,” said Tembo.
Participants at the International Training on Wheat Blast Screening and Surveillance. (Photo: CIMMYT)
Highlights from the training: discussions, lab exercises, and field visits
During the training, participants engaged in lectures, laboratory exercises, and field visits. There were insightful discussions on key topics including the fundamentals of wheat blast epidemiology, disease identification, molecular detection of the wheat blast pathogen, isolation and preservation techniques for the pathogen, disease scoring methods, disease management strategies, and field surveillance and monitoring.
The course also provided practical experience in disease evaluation at the Precision Phenotyping Platform (PPP) screening nursery located in Chilanga research station. This involved characterization of a diverse range of wheat germplasm with the aim of releasing resistant varieties in countries vulnerable to wheat blast. Additionally, participants undertook field visits to farmers’ fields, conducting surveillance of wheat blast-infected areas. They collected samples and recorded survey data using electronic open data kit (ODK) capture tools.
Participants listen to a lecture by B.N. Verma, director of Zambia Seed Co., on the history of wheat production in Zambia. (Photo: CIMMYT)
âThe killer disease needs to be understood and managed utilizing multi-faceted approaches to limit the expansion and damages it can cause to global wheat production. The Bangladesh Wheat and Maize Research Institute (BWMRI) is willing to share all the strategies it deployed to mitigate the effect of wheat blast,â said Golam Faruq, BWMRIâs director general.
Participants visited seed farms to gain practical insights into seed production processes and quality assurance measures. These visits provided first-hand knowledge of seed selection, breeding techniques, and management practices crucial for developing resistant wheat varieties. Participants also visited research sites and laboratories to observe advanced research methodologies and technologies related to wheat blast management. These visits exposed them to cutting-edge techniques in disease diagnosis, molecular analysis, and germplasm screening, enhancing their understanding of effective disease surveillance and control strategies.
Field visit. (Photo: CIMMYT)
âThe training and knowledge sharing event was a significant first step in developing understanding and capacity to deal with wheat blast for partners from several African countries. It was wonderful to see the efforts made to ensure gender diversity among participants,â said Professor Diane Saunders from the John Innes Centre, UK.
CIMMYT Global Wheat Program (GWP) scientists visited National Agricultural Research Systems (NARS) partners in Pakistan, Nepal, and India during February 2024. The key purpose was to review current approaches and explore new opportunities to enhance collaborative wheat improvement activities.
NARS partners described their current priorities and recent changes in their activities, while CIMMYT shared recent modernization efforts of its wheat breeding and highlighted opportunities to enhance collaborative wheat improvement. GWP representatives included Interim Wheat Director Kevin Pixley, and scientists Naeela Qureshi, Velu Govindan, Keith Gardner, Sridhar Bhavani, T.P. Tiwari, and Arun K Joshi.
Representatives from the Pakistan Agricultural Research Council (PARC) and CIMMYT meet to identify chances for improved cooperation in wheat breeding research. (Photo: Awais Yaqub/CIMMYT)
Planning the future of South Asian wheat
In each country, CIMMYT and NARS leaders held a one-day meeting to review and plan their wheat improvement partnership, with attendance from 25-30 wheat scientists in each country. The sessions aimed to review and identify bottlenecks to the wheat impact pathway in each country, describe recent changes in the breeding programs of CIMMYT and NARS partners, and prioritize and agree updates to the NARS-CIMMYT wheat improvement collaborations.
NARS partners highlighted their wheat improvement programs through field visits to research stations. Visitors attended Wheat Research Institute (ARI), Faisalabad and National Agricultural Research Center (NARC), Islamabad in Pakistan; National Wheat Research Program (NWRP), Bhairahawa and National Plant Breeding & Genetics Research Center (NPBGRC), Khumaltar in Nepal; and Indian Institute of Wheat and Barley Research (IIWBR), Punjab Agricultural University (PAU), Borlaug Institute for South Asia (BISA), and the Indian Agricultural Research Institute (IARI) in India.
The GWP team also visited: Faisalabad Agricultural University, with a special focus on collaborative zinc biofortification work in Pakistan; farmersâ fields in Nepal to see participatory evaluations of elite wheat lines (candidates for release as new varieties) and to hear from farmers about challenges and expectations from improved varieties; and the Lumbini Seed Company to learn about the crucial role of seed companies, bottlenecks, and opportunities in the pathway from research to impact in farmersâ fields.
NARS scientists and directors in all three countries were enthusiastic about the opportunities for enhanced partnership to adopt some of the modernizing technologies that AGG has brought to CIMMYT. Partners are especially keen to â
Receive earlier generation varieties, segregating breeding lines to empower them to select in their own environments.
Model and explore strategies to shorten their breeding cycles.
Apply quantitative genetics tools to better select parents for their crossing blocks.
Adopt experimental designs that improve efficiency.
Explore opportunities for co-implementing improvement programs through shared testing schemes, communities of practice (e.g. for quantitative genetics or use of exotic germplasm to address challenges from climate change), and more.
A highlight of the trip in Nepal: visiting on-farm trials, where farmers share insights about their preferences for improved varieties, where they often mentioned tolerance over lodging. (Photo: CIMMYT)
âThe visit provided CIMMYT and NARS wheat scientists with the opportunity to exchange experiences and ideas, and to explore ways of enhancing collaborations that will strengthen our joint impact on wheat farmers and consumers,â said Pixley.
Following these visits, the Bangladesh Wheat and Maize Research Institute (BWMRI) soon reached out to CIMMYT to request a similar review and planning meeting, with a vision to modernize and strengthen their wheat improvement partnership.
Successful global wheat disease surveillance and monitoring has resulted in early detection of wheat stem rust Ug99 in Nepal. A combination of vigilant field surveys and sampling by Nepalâs National Plant Pathology Research Centre (NPPRC) and National Wheat Research Program (NWRP), supported by rigorous and accurate disease diagnostics at the Global Rust Reference Center (GRRC), Denmark, resulted in confirmed detection of the Ug99 strain named TTKTT. The long running and sustained surveillance efforts undertaken by NPPRC and NWRP, including off-season surveys, proved vital in the detection of Ug99 in Nepal. Confirmed results were obtained from two field samples collected in early November 2023 from off-season summer wheat crops in Dolakha district, Nepal. Repeated experiments and high quality pathotyping and genotyping at GRRC confirmed the results.
âThe combination of molecular genotyping of incoming samples, without prior recovery in our laboratory and independent diagnostic assays of recovered stem rust isolates, confirmed the presence of Ug99 and a highly virulent race variant termed TTKTT,â says professor Mogens HovmĂžller, leader of the GRRC at Aarhus University in Denmark.
Suraj Baidya (NPPRC) and Roshan Basnet (National Wheat Research Program) undertake field surveys at Dandunghe, Dolakha, Nepal. (Photo: CIMMYT)
Ug99 was first detected in East Africa in 1998/99, and its unique virulence sparked fears that a large proportion of wheat cultivars globally would be at risk from this potentially devastating disease. The international wheat community came together through the Borlaug Global Rust Initiative (BGRI) to address the threats posed by Ug99. The BGRI partners have successfully monitored the evolution and spread of Ug99 and bred hundreds of resistant wheat varieties that are now being grown at scale in priority wheat growing regions. Migration of Ug99 from Africa to other regions, including South Asia, was always seen as likely due to the transboundary nature of the disease and long-distance dispersal of rust spores by wind.
Detection of a Ug99 race in Nepal is not therefore a surprise, but it highlights the effectiveness of the wheat rust surveillance and monitoring systems that have been developed. The disease was present at extremely low levels in the fields in Nepal, and early detection is one of the main factors in preventing disease spread. Other factors also contribute to reduced risk. The wheat on which the Ug99 race TTKTT was detected were fodder crops and cut soon after the surveys were completed, which prevented further buildup of disease. In addition, no wheat is grown in the main season in these areas, with farmers shifting to cultivation of potato (a non-host crop for stem rust).
According to Suraj Baidya, senior scientist and chief of NPPRC, âExtensive follow up surveys in the Dolakha detection area by NPPRC in the 2023/24 main season resulted in no wheat being observed and no detection of stem rust.â Similarly, extensive surveys by NPPRC throughout other wheat growing areas of Nepal in the 2023/24 main season have resulted in no reports of stem rust in the country. To date, extensive surveys in other countries in South Asia (Pakistan, Bangladesh, Bhutan) have not detected stem rust in 2023/24.
Although the current risk of stem rust outbreaks is considered to be low, detection of the Ug99 race TTKTT in Nepal is a clear reminder of the threat posed to wheat production in South Asia by the incursion of virulent stem rust races or other plant diseases of concern. âThe spread and risk from transboundary diseases like stem rust is increasing,â says Dave Hodson, leader of the Wheat Disease Early Warning Advisory Systems (DEWAS) project at CIMMYT. âSustained and increased surveillance efforts are needed across the region and expanded to include other important emerging diseases.â Successful deployment of Ug99 resistant cultivars through the BGRI partners, including CIMMYT, ICARDA and NARS, has decreased vulnerability, but it is important to note that the race TTKTT is a recently evolved variant of Ug99 with additional virulence compared to the original strains. As a result, not all cultivars in South Asia may have effective resistance today. Screening of germplasm and major cultivars from South Asia against TTKTT at the Kenya Agriculture and Livestock Research Organization (KALRO)/CIMMYT international stem rust screening nursery in Kenya is extremely important to get an accurate picture of current vulnerability.
The details of the diagnostic confirmation of Ug99 in Nepal are available at the GRRC website (see GRRC lab report)
Work on wheat disease surveillance and monitoring, plus breeding of resistant varieties is being supported by the DEWAS and AGG projects funded by BMGF and FCDO, UK.
Key partners â
National Plant Pathology Research Centre (NPPRC), Nepal. Contact: Suraj Baidya (suraj_baidya222@yahoo.co.in)
National Wheat Research Program (NWRP), Nepal. Contact: Roshan Basnet
Global Rust Reference Center (GRRC), Aarhus University, Denmark. Contact: Mogens HovmĂžller (mogens.hovmoller@agro.au.dk)
âA better understanding of the links between gender roles in household decision-making and the adoption of technologies can enhance the uptake of innovations in smallholder farming systems,â concludes a recently published paper by CIMMYT. The paper connects womenâs bargaining power in households with the adoption of rust resistant wheat varieties, based on the work of Accelerating Genetic Gains in Maize and Wheat (AGG) in Ethiopia.
âWhile an emerging body of literature finds positive correlations between womenâs influence in household decision-making and socioeconomic, health, and nutritional outcomes, few studies have analyzed the links between intra-household decision-making and the adoption of agricultural technologies,â said Michael Euler, agriculture research economist at CIMMYT.
A case study in Ethiopia
For this study, researchers used a dataset from Ethiopian wheat-producing households.
Ethiopia is the second-largest wheat producer in Africa, with an aggregate grain production of 5.5 million metric tons and 4-5 million farmers engaged in cultivation. The Ethiopian Highlands are a hot spot for wheat rust. With recurrent epidemics in the last decade, the emergence of new strains of wheat rust increased production risks. On the positive side, farmers seem to be responsive to the management of rust diseases. Rust-resistant bread wheat varieties, released since 2010, have been widely adopted by smallholder farmers across Ethiopia.
The CIMMYT study surveyed 1,088 wheat-producing households in Ethiopia to analyze the links between womenâs role in household decision-making concerning crop production and the adoption and turnover rates of rust-resistant wheat varieties. Female and male members from the same households responded separately, which facilitated capturing individual perceptions and the intra-household dynamics in decision-making.
Farmer Shumuna Bedeso weeds her wheat field. (Photo: Peter Lowe/CIMMYT)
Intra-household decision-making arrangements and wheat varietal choice
Overall, the study reveals a positive association between womenâs role in decision-making regarding the selection of wheat seed and the adoption of rust-resistant wheat varieties and wheat varietal turnover. Findings may be related to differences in risk aversion between women and men farmers. While women farmers may tend to advocate for the adoption of rust resistant varieties to avoid potential financial difficulties that arise from purchase of fungicide in the growing season, men farmers may be more inclined to adopt high yielding varieties and use fungicides to combat rust within the season.
Spouses may agree or have different opinions regarding their decision-making roles. Spousal agreement on the woman having a role in making crop variety decisions is associated with higher adoption rates compared to spousal agreement that the woman has no role. Joint decision-making with mutually uncontested spousal roles may yield better outcomes due to larger combined exposure to information, as well as spousal discussion and reflection on potential implications of the varietal choice decision.
Conclusion: It is about negotiation, contestation and consensus
Household decisions, including the decision to adopt agricultural technologies often result from negotiation, contestation, and consensus between wife and husband. This process is shaped by diverging interests, motivations and objectives, while its results are determined by different levels of individual bargaining power. âOur findings indicate that womenâs ownership of agricultural land and household assets is strongly associated with their active role in household decisions on wheat varietal choice, and with spousal agreement,â said Moti Jaleta, senior agricultural economist at CIMMYT. The dynamics in intra-household decision-making are likely to influence householdsâ adoption of agricultural technologies.
Disregarding the dynamics in decision-making implies that households are unilateral decision-makers, a scenario which probably does not hold true considering the level of spousal disagreement regarding their roles and influence in choosing crop varieties. A deeper understanding of the connections between gender dynamics in household decision-making and adoption choices can enhance the efficiency of public extension systems, increase the adoption rates of modern innovations, improve agricultural productivity, and enhance livelihoods in smallholder agriculture.
The experimental research station in Toluca, Mexico. (Photo: S. Herrera/CIMMYT)
In the ever-evolving field of agriculture, AGG-WHEAT is leading a transformative approach through rapid marker-selectable trait introgression in wheat breeding programs. This method aims to streamline the process of integrating desirable traits into various genetic backgrounds.
At the core of AGG-WHEAT’s strategy is the establishment of a centralized marker-selectable trait introgression pipeline. This initiative seeks to facilitate the transfer of specific genes from a centralized source into various genetic backgrounds within plant breeding programs. Molecular markers play a crucial role in efficiently identifying and selecting target traits.
The merits of a centralized trait introgression pipeline extend beyond convenience. This approach ensures a more uniform and controlled transfer of genetic material, enhancing the precision of trait introgressions across diverse breeding lines. Molecular markers streamline the selection process, improving the accuracy of desired trait incorporation into wheat varieties.
Speed breeding facilities in Toluca, Mexico
AGG-WHEAT’s marker-selectable trait introgression pipelines are implemented at the speed breeding facilities located at the CIMMYT research station in Toluca, Mexico. These facilities serve as the incubators for innovation, where new selection candidates are evaluated based on various criteria. The decision-making process involves an expert panel comprising geneticists, trait specialists, and breeders. This panel annually determines the selection candidates, considering factors such as trait demand, genetic diversity, evidence of Quantitative Trait Loci (QTL) effects, selection efficiency, and available funding.
The decision-making process involves a multifaceted evaluation of potential selection candidates. Documented trait pipelines and product profiles guide decision-making to ensure alignment with the overarching goals of wheat breeding programs. Considerations include the need for phenotypic variation and the existence of limited genetic diversity for the trait under consideration.
The decision-making process also explores existing in-house or external evidence of QTL effects and the underlying gene mechanisms. Selection efficiency, contingent on the availability of accurate molecular markers and a known purified donor parent, further refines the pool of potential candidates. Established phenotypic protocols for product testing and the crucial element of available funding complete the decision-making criteria.
Achievements
In a significant step towards innovation, the products of the first marker-selectable trait introgression pipelines entered yield trials in 2023. This marks a transition from conceptualization to tangible impact, reflecting the efficacy of AGG-WHEAT’s approach. A total of 97 F5-lines, cultivated through the marker-assisted backcross (MABC) scheme, now grace the fields.
These lines carry novel genes associated with fusarium head blight and rust resistance, derived from wheat genetic resources and wild relatives. The choice of these traits underscores AGG-WHEAT’s commitment to addressing challenges faced by wheat crops, ensuring improved resilience and sustainability in the face of evolving environmental conditions.
The success of these initial trait introgression pipelines represents more than a scientific achievement; it marks a pivotal moment in the trajectory of wheat breeding. The 97 F5-lines, standing as testaments to enhanced resistance traits, are poised to make a transition into mainstream breeding pipelines. This marks the commencement of a broader dissemination strategy, where these lines will be distributed for testing at National Agricultural Research and Extension Services (NARES).
The journey from the experimental fields to mainstream adoption involves a meticulous process. These lines, having undergone rigorous evaluation and selection, now hold the potential to catalyze changes in commercial wheat varieties. The lessons learned from their cultivation will shape future breeding strategies and contribute to the resilience of wheat crops in diverse agricultural landscapes.
Rapid marker table. (Photo: CIMMYT)
AGG-WHEAT’s lasting impact
AGG-WHEAT’s marker-selectable trait introgression stands as an innovative approach in wheat breeding. The centralized approach, the strategic use of molecular markers, and the meticulous decision-making process exemplify the commitment to excellence and precision. The journey from concept to realityâmarked by the entry of 97 F5-lines into yield trialsâsignals a new era in wheat breeding.
As these lines traverse from experimental fields to mainstream adoption, they carry the promise of transforming the landscape of commercial wheat varieties. AGG-WHEAT’s lasting impact goes beyond the scientific realm; it extends to the fields where farmers strive for sustainable and resilient wheat crops. In the tapestry of agricultural progress, AGG-WHEAT has woven a thread of innovation that holds the potential to redefine the future of wheat cultivation.
Healthy wheat and wheat affected by Ug99 stem rust in farmer’s field, Kenya. (Photo: CIMMYT)
The East African wheat breeding pipeline aims to improve wheat varieties and contribute to regional food security by ensuring a stable and resilient wheat supply. In 2022, CIMMYT, in partnership with the Kenya Agriculture and Livestock Research Organization (KALRO) established a Joint Breeding Program in Njoro, a town southwest of the Rift Valley in Kenya. This was one of the first integrated breeding pipelines between CGIAR and National Agricultural Research and Extension Systems (NARES) partners.
Over the last three decades, genetic trials of over 77 varieties have been conducted in several regions. In East Africa, an expanded testing network that spans over multiple research institutes in Kenya and Ethiopia has been established for Stage 1 and Stage 2 trials in network countries. This makes the pipeline a powerful driver of positive impacts, rapidly enhancing both farm productivity and production in target regions. In Kenya specifically, a genetic gain trial was conducted at two sites in 2023 with the Stage 1 trials evaluated across eight locations. These are being distributed to NARES partners to establish correlations between the breeding site in Kenya and the Target Population of Environments (TPEs) in the E&SSA regions. This breeding pipeline demarcates the population improvement from product development. Other areas in the trials include the enhancement of genetic diversity to build resilience, adaptability, and quality enhancement to meet market and consumer demands.
The trial will continue in 2024 and 2025 to establish a baseline for genetic gains and to enable the assessment of the breeding pipeline’s progress in the coming years. The first cohort of pipeline materials (250 crosses) has been advanced to F2 generation and will be ready for distribution to E&SSA partners in 2025.
Accelerated breeding
The anticipation is that accelerated breeding techniques will be implemented in Kenya by incorporating a three-year rapid generation bulk advancement (RGBA) scheme aimed at diminishing the time necessary for variety development and release. This collaborative effort encompasses various activities, including joint crossing block, generation advancement, yield testing, and population improvement. The three-year RGBA scheme, coupled with data-driven selection utilizing advanced data analytics (GEBV, SI) and genomic selection approaches, is expected to play a pivotal role in facilitating informed breeding decisions in the East African region.
3-year RGBA scheme. (Photo: Sridhar Bhavani)
Varietal improvement
The project aims to develop and release improved wheat varieties that are well adapted to the East African agroecological conditions. The Kenyan environment closely mirrors wheat-growing conditions in Ethiopia, Tanzania, Uganda, Rwanda, and Burundi, and spillover impacts to sub-Saharan countries such as Zambia and Zimbabwe. This strategic alignment with local conditions and close cooperation with NARES partner organizations has proven to be very effective in addressing critical gaps, including high-yield potential, disease resistance, and climate resilience, and aligns with CIMMYTâs overall wheat strategy for Africa.
Enhanced disease resistance
Kenya stands out as a hotspot for rust diseases, showcasing notable diversity in stem rust variants (ug99) and yellow rust. The virulence spectrums of these diseases differ from those found in Mexico, posing challenges to effective breeding strategies. It is expected that the breeding pipeline will effectively tackle these challenges as well as those associated with fusarium, Septoria, and wheat blast, which are on the rise in African environments.
Climate adaptation
The East African wheat breeding pipeline is committed to breeding wheat varieties that can thrive in changing climatic conditions, including heat and drought tolerance, and expanding testing in marginal rainfed environments experiencing heat and drought stress.
Through the support of our partners and funders from the Bill and Melinda Gates Foundation, Foundation for Food and Agriculture Research (FFAR), and Foreign, Commonwealth and Development Office FCDO, the following achievements can be reported:
Regional collaboration and cooperation
For over four decades, the enduring collaboration with KALRO has yielded significant successes including the operation of the largest phenotyping platform for stem rust and various diseases. The Mexico-Kenya shuttle breeding program, incorporating Ug99 resistance, has successfully countered the threat of stem rust by releasing over 200 varieties in targeted regions and advancing the East African wheat breeding pipeline. The plan is to replicate these accomplishments in other target regions through the E&SSA network. To address limitations in KALRO’s breeding program and to conduct standardized trials, a strategic partnership with a private seed company Agventure Cereal Growers Association has been established. This collaboration will facilitate yield testing at multiple sites in Kenya to identify lines with superior performance for the East African region. So far, lines exhibiting high yield potential of up to 8 tons/ha, even under rain-fed environments, have been identified. The collaborative efforts are already making a noticeable impact, as evidenced by reports indicating increased adoption of zero-tillage practices among farmers. This shift has proven beneficial, especially during years marked by heat and drought challenges, resulting in higher returns for these farmers.
Increased capacity of national programs
From 1-13 October 2023, the AGGMW project held a training program on “Enhancing Wheat Disease Early Warning Systems, Germplasm Evaluation, Selection, and Tools for Improving Wheat Breeding Pipelines”. The course which brought together 33 participants from over 13 countries was held at the KALRO station in Njoro- Kenya. The comprehensive program covered a wide range of crucial subjects in the field of wheat breeding and research. Topics included breeding methodologies, experimental design, data collection, statistical analysis, and advanced techniques such as genomic selection. Participants also engaged in practical hands-on data analysis, explored rust pathology, and delved into early warning systems. Moreover, they had the opportunity for direct evaluation and selection of breeding materials. The course aimed to equip participants with a diverse skill set and knowledge base to enhance their contributions to the field of wheat breeding and research.
Other initiatives supporting the breeding pipeline include CGIAR programs, Accelerated Breeding and Crops to End Hunger. This multi-faceted approach within the breeding pipeline underpins the importance of fostering regional collaboration, knowledge sharing, and strategic investments in enhancing wheat production and addressing critical challenges in the region.
In the dynamic landscape of wheat breeding, early access to germplasm emerges as a strategic catalyst for accelerating variety turnover and meeting the evolving challenges faced by farmers in South Asia. Since its inception, the Accelerating Genetic Gains in Maize and Wheat (AGG) project has pioneered new tools to optimize the wheat breeding process. One such tool, the efficient and low-cost 3-year breeding cycle, has been fine-tuned in Mexico, using the Toluca screenhouse and field advancement in ObregĂłn, laying the groundwork for faster variety turnover.
The inaugural set of lines generated through this enhanced breeding cycle is already undergoing Stage 1 trials in the ObregĂłn 2023-24 season. However, the innovation doesn’t stop there; to expedite the variety release process and garner robust data from the Target Population of Environments (TPE), Stage 2 lines are being rigorously tested at over 20 sites in South Asia through collaboration with National Agricultural Research and Extension Services (NARES) partners. In the seasons spanning 2021-2024, a total of 918 Stage 2 lines underwent rigorous trials, aiming to provide early access to improved wheat lines for testing and release by NARES and establish a genetic correlation matrix between ObregĂłn selection environments and diverse sites across South Asia.
These extensive trials serve a dual purpose. Firstly, they facilitate early access to improved wheat lines for testing and release by NARES, bolstering the agricultural landscape with resilient and high-yielding varieties. Secondly, they contribute to the establishment of a genetic correlation matrix between the selection environments in ObregĂłn and the diverse sites across South Asia. This matrix becomes a guiding compass, aiding in selecting the most promising lines for broader TPEs in South Asia and beyond.
Transformative impact on wheat varieties in South Asia
Through the support of our partners and funders from the Bill & Melinda Gates Foundation, the Foundation for Food and Agriculture Research (FFAR), the UK Foreign, Commonwealth & Development Office (FCDO), and the US Agency for International Development (USAID), great achievements have been recorded throughout the region. India, a prominent player in wheat cultivation, stands as a testament to the transformative impact of early access to advanced lines. The top three varieties, namely DBW187, DBW303, and DBW 222, covering over 6 million hectares, trace their roots to CIMMYT varieties. Adopting a fast-track approach through early-stage testing of these advanced lines at BISA sites in India, supported by the Delivering Genetic Gain in Wheat (DGGW) project, facilitated the release of these varieties two years ahead of the regular testing process. This expedited varietal release was complemented by the innovative early seed multiplication and dissemination approach introduced by the Indian Council of Agricultural Research (ICAR). Recent additions to this accelerated channel include varieties such as DBW 327, DBW 332, DBW 370, and 371, promising further advancements in wheat cultivation.
Pakistan
In Pakistan, the early access to advanced lines has been a catalyst for releasing high-yielding, climate-resilient, and nutritious wheat varieties. In 2023 alone, 12 new varieties were released, with the renowned ‘Akbar-19,’ introduced in 2019, covering a substantial 42% of cultivated land in Punjab. Data released by the Ayub Agricultural Research Institute (AARI), shows that this variety, known for its high yield potential, disease resistance, and enriched zinc content, has significantly contributed to increased wheat production in the region.
Nepal
Guided by policy interventions in the national varietal testing process, Nepal has experienced the fast-track commercialization of high-yielding and climate-resilient wheat varieties. Allowing multilocation testing of CIMMYT nurseries and advanced elite lines, Nepal released six biofortified zinc wheat varieties in 2020. The expeditious seed multiplication of these released and pre-release varieties has facilitated the rapid spread of new and improved wheat varieties.
The strategic utilization of early access to wheat germplasm in South Asia holds promise in accelerating variety turnover, offering farmers resilient and high-performing wheat varieties. Collaborative efforts between research institutions, government bodies, and international organizations exemplify the power of innovation in transforming agriculture. With an ongoing dedication to refining breeding cycles, expanding testing initiatives, and fostering collaboration, the AGG project contributes to building a sustainable and resilient agricultural future in South Asia. Early access to wheat germplasm emerges as a practical approach in this scientific endeavor, laying the foundation for a climate-resilient and food-secure region. The successes witnessed in India, Pakistan, and Nepal underscore the transformative potential of this approach, offering tangible benefits for agricultural communities in South Asia and beyond. In navigating the complexities of a changing climate and growing food demand, early access to wheat germplasm remains a pragmatic ally, propelling agricultural innovation and resilience to new heights.
Across all production environments in Kenya, early-maturity products demonstrate strong sales. This was revealed in a recent study by the CGIAR Initiative on Market Intelligence. During the long-rains season, farmers in higher rainfall production environmentsâwet, mid and high altitudesâpurchased early-maturity seed products despite potentially lower yields. Also, the short-rains season, which represents almost one-fourth of total maize seed sales, was dominated by early-maturity products.
These insights were obtained through a panel of maize-seed sales data from 722 agrodealers in Kenya during two short-rains seasons and three long-rains seasons in 2020â2022. The study also offers insights into the extent the maturity level of seed products, purchased by farmers in Kenya, aligns with the production environment where they were sold. Market Intelligence applies eight criteria to identify seed product market segments (SPMSs) for CGIAR crop breeding. In the application of these criteria to maize in East Africa, two conditions distinguish the segments: production environment and maturity level. The other criteria do not vary. A key indicator for prioritizing breeding investments across segments is the relative size of SPMSs. In the case of maize, and other crops, teams generally use geospatial data to identify the area of production environments, with the assumption that farmers in each production environment would use the seed product with the maturity level designed for that environment.
The paper contends that a stronger focus on using sales data to inform breeding decisions in maize, and potentially other crops where retailers play an important role in seed distribution, should become a priority for market intelligence. Future work will engage stakeholders in maize seed systems in other countries of East Africa about the changes in demand for earlier-maturing products and the implications for segmentation.
The CGIAR Initiative on Market Intelligence (âMarket Intelligenceâ for brevity) represents a new effort to engage social scientists, crop-breeding teams, and others to work together toward the design and implementation of a demand-led breeding approach. In 2022, the Market Intelligence Brief (MIB) series was created as a valuable communication tool to support informed decision making by crop breeders, seed-system specialists, and donors on future priorities and investments by CGIAR, NARS, the private sector, and non-governmental organizations (NGOs).
The author would like to thank all funders who supported this research through their contributions to the CGIAR Trust Fund. This project received funding from the Accelerating Genetic Gains in Maize and Wheat project (AGG) [INV-003439], funded by Bill & Melinda Gates Foundation; Foundation for Food & Agriculture Research (FFAR); United States Agency for International Development (USAID); and United Kingdomâs Foreign, Commonwealth & Development Office (FCDO).
India can applaud a hallmark in national food production: in 2023, the harvest of wheatâIndiaâs second most important food cropâwill surpass 110 million tons for the first time.
This maintains India as the worldâs number-two wheat producer after China, as has been the case since the early 2000s. It also extends the wheat productivity jumpstart that begun in the Green Revolutionâthe modernization of Indiaâs agriculture during the 1960s-70s that allowed the country to put behind it the recurrent grain shortages and extreme hunger of preceding decades.
âNewer and superior wheat varieties in India continually provide higher yields and genetic resistance to the rusts and other deadly diseases,â said Distinguished Scientist Emeritus at CIMMYT, Ravi Singh. âMore than 90 percent of spring bread wheat varieties released in South Asia in the last three decades carry CIMMYT breeding contributions for those or other valued traits, selected directly from the Centerâs international yield trials and nurseries or developed locally using CIMMYT parents.â
Wheat grain yield in Indian farmersâ fields rose yearly by more than 1.8 percentâsome 54 kilograms per hectareâin the last decade, a remarkable achievement and significantly above the global average of 1.3 percent. New and better wheat varieties also reach farmers much sooner, due to better policies and strategies that speed seed multiplication, along with greater involvement of private seed producers.
âThe emergence of Ug99 stem rust disease from eastern Africa in the early 2000s and its ability to overcome the genetic resistance of older varieties drove major global and national initiatives to quickly spread the seed of newer, resistant wheat and to encourage farmers to grow it,â Singh explained. âThis both protected their crops and delivered breeding gains for yield and climate resilience.â
CIMMYT has recently adopted an accelerated breeding approach that has reduced the breeding cycle to three years and is expected to fast-track genetic gains in breeding populations and hasten delivery of improvements to farmers. The scheme builds on strong field selection and testing in Mexico, integrates genomic selection, and features expanded yield assays with partner institutions. To stimulate adoption of newer varieties, the Indian Institute of Wheat and Barley Research (IIWBR, of the Indian Council of Agricultural Research, ICAR) operates a seed portal that offers farmers advanced booking for seed of recently released and other wheat varieties.
Private providers constitute another key seed source. In particular, small-scale seed producers linked to the IIWBR/ICAR network have found a profitable business in multiplying and marketing new wheat seed, thus supporting the replacement of older, less productive or disease susceptible varieties.
Farm innovations for changing climates and resource scarcities
Following findings from longstanding CIMMYT and national studies, more Indian wheat farmers are sowing their crops weeks earlier so that the plants mature before the extreme high temperatures that precede the monsoon season, thus ensuring better yields.
New varieties DBW187, DBW303, DBW327, DBW332 and WH1270 can be planted as early as the last half of October, in the northwestern plain zone. Recent research by Indian and CIMMYT scientists has identified well-adapted wheat lines for use in breeding additional varieties for early sowing.
Resource-conserving practices promoted by CIMMYT and partners, such as planting wheat seed directly into the unplowed fields and residues from a preceding rice crop, shave off as much as two weeks of laborious plowing and planking.
Weeds in zero-tillage wheat in India. (Photo: Petr Kosina/CIMMYT)
âThis âzero tillageâ and other forms of reduced tillage, as well as straw management systems, save the time, labor, irrigation water and fuel needed to plant wheat, which in traditional plowing and sowing requires many tractor passes,â said Arun Joshi, CIMMYT wheat breeder and regional representative for Asia and managing director of the Borlaug Institute for South Asia (BISA). âAlso, letting rice residues decompose on the surface, rather than burning them, enriches the soil and reduces seasonal air pollution that harms human health in farm communities and cities such as New Delhi.â
Sustainable practices include precision levelling of farmland for more efficient irrigation and the precise use of nitrogen fertilizer to save money and the environment.
Science and policies ensure future wheat harvests and better nutrition
Joshi mentioned that increased use of combines has sped up wheat harvesting and cut post-harvest grain losses from untimely rains caused by climate change. âAdded to this, policies such as guaranteed purchase prices for grain and subsidies for fertilizers have boosted productivity, and recent high market prices for wheat are convincing farmers to invest in their operations and adopt improved practices.â
To safeguard Indiaâs wheat crops from the fearsome disease wheat blast, native to the Americas but which struck Bangladeshâs wheat fields in 2016, CIMMYT and partners from Bangladesh and Bolivia have quickly identified and cross-bred resistance genes into wheat and launched wheat disease monitoring and early warning systems in South Asia.
âMore than a dozen wheat blast resistant varieties have been deployed in eastern India to block the diseaseâs entry and farmers in areas adjoining Bangladesh have temporarily stopped growing wheat,â said Pawan Singh, head of wheat pathology at CIMMYT.
Building on wheatâs use in many Indian foods, under the HarvestPlus program CIMMYT and Indian researchers applied cross-breeding and specialized selection to develop improved wheats featuring grain with enhanced levels of zinc, a micronutrient whose lack in Indian diets can stunt the growth of young children and make them more vulnerable to diarrhea and pneumonia.
âAt least 10 such âbiofortifiedâ wheat varieties have been released and are grown on over 2 million hectares in India,â said Velu Govindan, CIMMYT breeder who leads the Centerâs wheat biofortification research. âIt is now standard practice to label all new varieties for biofortified traits to raise awareness and adoption, and CIMMYT has included high grain zinc content among its primary breeding objectives, so we expect that nearly all wheat lines distributed by CIMMYT in the next 5-8 years will have this trait.â
A rigorous study published in 2018 showed that, when vulnerable young children in India ate foods prepared with such zinc-biofortified wheat, they experienced significantly fewer days of pneumonia and vomiting than would normally be the case.
Celebrating joint achievements and committing for continued success
The April-June 2018 edition of the âICAR Reporterâ newsletter called the five-decade ICAR-CIMMYT partnership in agricultural research ââŠone of the longest and most productive in the worldâŠâ and mentioned mutually beneficial research in the development and delivery of stress resilient and nutritionally enriched wheat, impact-oriented sustainable and climate-smart farming practices, socioeconomic analyses, and policy recommendations.
Speaking during an August 2022 visit to India by CIMMYT Director General Bram Govaerts, Himanshu Pathak, secretary of the Department of Agricultural Research and Education (DARE) of Indiaâs Ministry of Agriculture and Farmers Welfare and Director General of ICAR, âreaffirmed the commitment to closely work with CIMMYT and BISA to address the current challenges in the field of agricultural research, education and extension in the country.â
âThe ICAR-CIMMYT collaboration is revolutionizing wheat research and technology deployment for global food security,â said Gyanendra Singh, director, ICAR-IIWBR. âThis in turn advances global peace and prosperity.â
India and CIMMYT wheat transformers meet in India in February, 2023. From left to right: Two students from the Indian Agricultural Research Institute (IARI); Arun Joshi, CIMMYT regional representative for Asia; Rajbir Yadav, former Head of Genetics, IARI; Gyanendra Singh, Director General, Indian Institute of Wheat and Barley Research (IIWBR); Bram Govaerts, CIMMYT director general; Harikrishna, Senior Scientist, IARI. (Photo: CIMMYT)
According to Govaerts, CIMMYT has concentrated on strategies that foster collaboration to deliver greater value for the communities both ICAR and the Center serve. âThe way forward to the next milestone â say, harvesting 125 million tons of wheat from the same or less land area â is through our jointly developing and making available new, cost effective, sustainable technologies for smallholder farmers,â he said.
Wheat research and development results to date, challenges, and future initiatives occupied the table at the 28th All India Wheat & Barley Research Workersâ Meeting, which took place in Udaipur, state of Rajasthan, August 28-30, 2023, and which ICAR and CIMMYT wheat scientists attended.
Generous funding from various agencies, including the following, have supported the work described: The Australian Centre for International Agricultural Research (ACIAR), the Bill & Melinda Gates Foundation, the Federal Ministry for Economic Cooperation and Development of Germany (BMZ), the Foreign, Commonwealth & Development Office of UKâs Government (FCDO), the Foundation for Food & Agricultural Research (FFAR), HarvestPlus, ICAR, the United States Agency for International Development (USAID), funders of the One CGIAR Accelerated Breeding Initiative (ABI), and the Plant Health Initiative (PHI).
Wheat is critical to millions of households in Pakistan as it serves a dual role as a foundational part of nutritional security and as an important part of the countryâs economy. Pakistanâs goal to achieve self-sufficiency in wheat production is more attainable with the release of 31 wheat varieties since 2021.
These new seeds will help the countryâs 9 million hectares of cultivated wheat fields become more productive, climate resilient, and disease resistantâa welcome development in a region where climate change scenarios threaten sustained wheat production.
The varieties, a selection of 30 bread wheat and 1 durum wheat, 26 of which developed from wheat germplasm provided by the International Maize and Wheat Improvement Center (CIMMYT) were selected after rigorous testing of international nurseries and field trials by partners across Pakistan. During this period, three bread wheat varieties were also developed from local breeding programs and two varieties (one each of durum and bread wheat) were also developed from the germplasm provided by the ICARDA. These efforts are moving Pakistan closer to its goal of improving food and nutrition security through wheat production, as outlined in the Pakistan Vision 2025 and Vision for Agriculture 2030.
Harvesting wheat in Tandojam, Pakistan (Photo: CIMMYT)
Over multiple years and locations, the new varieties have exhibited a yield potential of 5-20% higher than current popular varieties for their respective regions and also feature excellent grain quality and attainable yields of over seven tons per hectare.
The new crop of varieties exhibit impressive resistance to leaf and yellow rusts, compatibility with wheat-rice and wheat-cotton farming systems, and resilience to stressors such as drought and heat.
Battling malnutrition
Malnutrition is rampant in Pakistan and the release of biofortified wheat varieties with higher zinc content will help mitigate its deleterious effects, especially among children and women. Akbar-2019, a biofortified variety released in 2019, is now cultivated on nearly 3.25 million hectares. Farmers like Akbar-2019 because of its 8-10% higher yields, rust resistance, and consumers report its good chapati (an unleavened flatbread) quality.
âIt is gratifying seeing these new varieties resulting from collaborative projects between Pakistani wheat breeding programs and CIMMYT along with funding support from various donors (USAID, Bill & Melinda Gates Foundation, HarvestPlus, and FCDO) and the government of Pakistan,â said Ravi Singh, wheat expert and senior advisor.
Closing the yield gap between research fields and smallholder fields
Releasing a new variety is only the first step in changing the course of Pakistanâs wheat crop. The next step is delivering these new, quality seeds to markets quickly so farmers can realize the benefits as soon as possible.
Increasing evidence suggests the public sector cannot disseminate enough seeds alone; new policies must create an attractive environment for private sector partners and entrepreneurs.
Field monitoring wheat fields (Photo: CIMMYT)
âPakistan has developed a fast-track seed multiplication program which engages both public and private sectors so the new varieties can be provided to seed companies for multiplication and provided to farmers in the shortest time,â said Javed Ahmad, Wheat Research Institute chief scientist.
Strengthening and diversifying seed production of newly released varieties can be done by decentralizing seed marketing and distribution systems and engaging both public and private sector actors. Marketing and training efforts need to be improved for women, who are mostly responsible for household level seed production and seed care.
A concerted effort to disseminate the improved seed is required, along with implementing conservation agriculture based sustainable intensification, to help Pakistanâs journey to self-sufficiency in wheat production.
The devastating disease wheat blast is a threat to crop production in many South Asian countries. In Bangladesh, it was first identified in seven southern and southwestern districts in 2016, and later spread to 27 others causing significant damage. The International Maize and Wheat Improvement Center (CIMMYT) is working with the Bangladesh Wheat and Maize Research Institute (BWMRI) and other national partners to conduct research and extension activities to mitigate the ongoing threat.
From March 1-10, 2023, a group of 46 wheat researchers, government extension agents, and policy makers from ten countries â Bangladesh, Brazil, China, Ethiopia, India, Japan, Mexico, Nepal, Sweden, and Zambia â gathered in Jashore, Bangladesh to learn about and exchange experiences regarding various wheat diseases, particularly wheat blast. Following the COVID-19 pandemic, this was the first in-person international wheat blast training held in Bangladesh. It focused on the practical application of key and tricky elements of disease surveillance and management strategies, such as resistance breeding and integrated disease management.
Training participants get hands-on practice using a field microscope, Bangladesh. (Photo: Ridoy/CIMMYT)
âThis is an excellent training program,â said Shaikh Mohammad Bokhtiar, executive chairman of the Bangladesh Agriculture Research Council (BARC), during the opening session. âParticipants will learn how to reduce the severity of the blast disease, develop and expand blast resistant varieties to farmers, increase production, and reduce imports.â
This sentiment was echoed by Golam Faruq, director general of BWMRI. âThis program helps in the identification of blast-resistant lines from across the globe,â he said. âFrom this training, participants will learn to manage the devastating blast disease in their own countries and include these learnings into their national programs.â
Hands-on training
The training was divided into three sections: lectures by national and international scientists; laboratory and field experiment visits; and trips to farmersâ fields. Through the lecture series, participants learned about a variety of topics including disease identification, molecular detection, host-pathogen interaction, epidemiology and integrated disease management.
Hands-on activities were linked to working on the Precision Phenotyping Platform (PPP), which involves the characterization of more than 4,000 wheat germplasm and releasing several resistant varieties in countries vulnerable to wheat blast. Participants practiced taking heading notes, identifying field disease symptoms, tagging, and scoring disease. They conducted disease surveillance in farmersâ fields in Meherpur and Faridpur districts â both of which are extremely prone to wheat blast â observing the disease, collecting samples and GPS coordinates, and completing surveillance forms.
Muhammad Rezaul Kabir, senior wheat breeder at BWMRI, explains the Precision Phenotyping Platform, Bangladesh. (Photo: Md. Harun-Or-Rashid/CIMMYT)
Participants learned how to use cutting-edge technology to recognize blast lesions in leaves using field microscopes. They went to a pre-installed spore trapping system in a farmer’s field to learn about the equipment and steps for collecting spore samples, observing them under a compound microscope, and counting spores. They also visited the certified seed production fields of Shawdesh Seed, a local company which has played an important role in promoting wheat blast resistant varieties BARI Gom 33 and BWMRI Gom 3 regionally, and Bangabandhu Sheikh Mujibur Rahman Agricultural University (BSMRAU) in Gazipur to see current wheat blast research in action.
Blast-resistance in Bangladesh
âI am so happy to see the excellent infrastructure and work ethics of staff that has made possible good science and impactful research come out of the PPP,â said Aakash Chawade, associate professor in Plant Breeding at the Swedish University of Agricultural Sciences. âRapid development of blast-resistant varieties and their dissemination will help Bangladesh mitigate the effects of wheat blast, not only inside the country but by supporting neighboring ones as well.â
Training participants scout and score disease in a blast-infected wheat field, Bangladesh. (Photo: Md. Harun-Or-Rashid/CIMMYT)
âBesides the biotic and abiotic challenges faced in wheat production, climate change and the Russia-Ukraine crisis are further creating limitations to wheat production and marketing,â said Pawan Kumar Singh, head of Wheat Pathology at CIMMYT and lead organizer of the training. âDue to the development of blast-resistant wheat varieties and its commercial production under integrated disease management practices, the domestic production of wheat in Bangladesh has increased and there is increased interest from farmers in wheat.â
Dave Hodson, a principal scientist at CIMMYT and one of the trainingâs resource speakers, added: âThis is a remarkable success that researchers developed two blast resistant varieties in Bangladesh urgently. It was only achievable because of the correct measures taken by the researchers and support of Government policies.â
However, there are still some barriers to widespread adoption of these varieties. As such, in parallel to other activities, a team from Bangladesh Agricultural University (BAU) joined the field trip to meet local farmers and conduct research into the socio-economic factors influencing the adoption and scaling of relevant wheat varieties.
Agriculture offers major solutions to several global challenges â most notably the tightly interlinked challenges of meeting Sustainable Development Goals (SDGs) on hunger (SDG2), extreme poverty (SDG1), and climate change (SDG13). CGIAR, in concert with a wide network of partners, has a vital role to play in transforming agri-food and land systems in the face of the climate emergency â ultimately benefiting low-income producers and consumers who are most at risk.
What is Crops to End Hunger?
Crops to End Hunger (CtEH) is a CGIAR initiative to accelerate and modernize the development, delivery and widescale use of a steady stream of new crop varieties. These new varieties are developed to meet the food, nutrition and income needs of producers and consumers, respond to market demand and provide resilience to pests, diseases and new environmental challenges arising from climate change.
CGIARâs plant breeding program has made major contributions to global food security since the mid 1960s, but there is evidence that the rate of adoption of new varieties has slowed. CtEH will support the acceleration of breeding cycles and application of modern breeding methods needed for both productivity gains and climate change adaptation. Farmers need varieties bred in and for the current climate, but are generally using varieties selected 20-30 years ago. In addition, many new varieties are insufficiently improved to induce farmers to adopt them. Prioritization of crops by specific geographies is based on projected benefits to poverty reduction and nutrition, and is an integral dimension of the modernization effort. Using market research, crop breeders gain greater awareness of the traits preferred by men and women farmers, consumers and others along the value chain, integrating them into âproduct profilesâ that guide breeding. Delivery of varieties is done through integrated partnerships and linkages to seed systems in-country, in which national regulatory agencies take responsibility for the release of improved seeds, while public agencies, community organizations and private seed companies undertake multiplication, distribution and promotion to reach farmersâ fields.
In 2017-18, a multi-Funder group, including the United States Agency for International Development (USAID), the Bill & Melinda Gates Foundation (BMGF), the UK Foreign, Commonwealth and Development Office (FCDO), the German Federal Ministry for Economic Cooperation and Development (BMZ) and the Australian Centre for International Agricultural Research (ACIAR), agreed to launch a modernization program for public plant breeding in lower-income countries. The CtEH initiative will invigorate breeding for the staple crops most important to smallholder farmers and poor consumers.
How does it work?
CtEH supports focused, science-based, well-resourced and long-term CGIAR Programs and investments in modern plant breeding on priority crops, which build on:
CGIARâs comparative advantages in global public goods research on crop breeding and genetics;
CGIARâs central role and responsibility for the conservation and characterization of the worldâs crop biodiversity, which is held in trust by CGIAR Research Centers for the world community.
This initiative aims to accelerate a transition in CGIAR crop breeding to address very different challenges from those faced in the Green Revolution. Twenty CGIAR crops, including cereals, legumes and root crops, have been chosen for this breeding initiative.
One part of this challenge is for breeding to modernize in terms of its objectives beyond pure yield gain â to address the expanding demand for improved varieties to meet biotic and abiotic stresses, such as climate change and environmental degradation, and to include a wider set of nutritional and market traits, as well as traits relevant to both end-users and value chains, which would increase the adoption rate of newly-bred varieties.
The first step towards modernization of breeding programs is to identify the gaps â the areas that need to be addressed or improved. The Breeding Program Assessment Tool (BPAT) has been developed for this purpose. The deployment of BPAT has been administered by the University of Queensland and has now been used to assess the breeding programs across CGIAR Research Centers. Examples of gaps include cross-CGIAR data management tools, access to low-cost genotyping, and sharing high-quality technical advice across programs and with partners.
What will result?
This process of improvement and modernization of CGIAR breeding programs will provide multiple benefits:
For a given level of investment it is anticipated that each breeding program will achieve increased rates of genetic gain and scale of impact â through adoption of farmer-preferred, market-demanded, climate-resilient varieties.
There will be further opportunity to integrate and support allied CGIAR crop programs, and to apply best practices across CGIAR Research Centers.
A stronger partnership and closer cooperation with national breeding programs, including national research institutes, universities and small and medium-sized enterprises in the private sector in low-income countries, as well as multilateral seed companies and advanced research institutes.
Adopting standardized ways of reporting needs, opportunities and progress will provide Funders with a transparent view of where and how they are getting high rates of return for their investment.
With this new initiative, CGIAR will enhance its contributions to the Sustainable Development Goals towards 2030 through high-priority staple crops tailored for the specific needs of targeted regions and their populations.
Delegates with other officials in front of the seminar room. (Photo: Biswajit/BWMRI)
Representatives from Australian Centre for International Agricultural Research (ACIAR) and Bangladesh Agricultural Research Council (BARC) paid a visit to Bangladesh to see the valuable work of the Precision Phenotyping Platform (PPP).
PPP was established in response to the devastating wheat blast disease, which was first reported in the country in 2016.
Technical and financial support from the International Maize and Wheat Improvement Center (CIMMYT), the Australian Commission for International Agricultural Research and the Australian Centre for International Agricultural Research, along with other funders, has contributed to the effort to combat the disease.
This is achieved by generating precise data for wheat blast resistance in germplasm in Bangladesh, as well as other wheat growing countries. This PPP has been used to screen elite lines and genetic resources from various countries.
On February 16 and 17, 2023, two groups of national and international delegations visited the BWMRI-CIMMYT collaborative research platform PPP at the BWMRI regional station in Jashore, Bangladesh.
The first group was made up of representatives from both the Australian Commission for International Agricultural Research and the Australian Centre for International Agricultural Research. This included seven commissioners under the direction of Fiona Simson, along with ACIAR senior officials from Australia and India.
The other group was from BARC, which was led by Executive Chairman Shaikh Mohammad Bokhtiar, along with Golam Faruq, Director General of BWMRI, and Andrew Sharpe, Bangabandhu Research Chair, Global Institute of Food Security (GIFS), University of Saskatchewan in Canada.
Both delegations were welcomed by Muhammad Rezaul Kabir, the Senior Wheat Breeder at BWMRI. Kabir gave a brief presentation about the platform and other wheat blast collaborative research programs in the seminar room.
The delegations then went to the PPP field, where BWMRI researchers Kabir and Robiul Islam, as well as CIMMYT researcher Md. Harun-Or-Rashid, explained further information about the BWMRI-CIMMYT collaborative research. Both commissioners and delegates appreciated seeing the work being conducted in person by the national and international collaborations of BWMRI and CIMMYT on wheat blast research.
Visitors observing blast disease symptoms in wheat leaves. (Photo: Muhammad Rezaul Kabir/BWMRI)
âIt is important, innovative work, that is affecting not only Bangladesh but many countries around the world that are now starting to be concerned about the impacts of wheat blast,â commissioner Simson said. âThis study is very important for Australia and we are pleased to be contributing to it.â
Lindsay Falvey, another commissioner, added, âThis is a wonderful experiment, using high-level science and technologies to combat wheat blast in Bangladesh. The experiment is well-planned. Overall, it is an excellent platform.â
ACIAR delegate Eric Huttner added to the praise for the project. âThe platform is performing extremely well for the purpose of evaluating lines, resistance to the disease and thatâs very useful for Bangladesh and rest of the world,â he said. âThis is a gift that Bangladesh is giving to the neighboring countries to protect wheat.â
The delegates pledged to share their expert advice with the Minister of Foreign Affairs in Bangladesh in order to increase investments and improve facilities for agricultural research programs in the country.
Golam Faruq, Director General of BWMRI discussing the PPP with Shaikh Mohammad Bokhtiar, Executive Chairman of BARC (Photo: Md. Harun-Or-Rashid/CIMMYT)
âThis is an excellent work,â Executive Chairman of BARC, Bokhtiar said. âWe can get more information from screening activities by using bioinformatics tools and training people through the BARC-GIFS program.â
Pawan Kumar Singh, Head of Wheat Pathology at CIMMYT-Mexico and Project Leader, coordinated the visits virtually and expressed his thanks to the delegations for their visit to the platform. This PPP, within a short span of few years, has been highly impactful, characterizing more than 15,000 entries and releasing several resistant varieties in countries vulnerable to wheat blast.
The Wheat Disease Early Warning Advisory System (Wheat DEWAS) project is bringing new analytic and knowledge systems capacity to one of the worldâs largest and most advanced crop pathogen surveillance systems. With Wheat DEWAS, researchers are building an open and scalable system capable of preventing disease outbreaks from novel pathogen strains that threaten wheat productivity in food vulnerable areas of East Africa and South Asia.
The system builds from capabilities developed previously by multi-institutional research teams funded through long-term investments in rust pathogen surveillance, modelling, and diagnostics. Once fully operationalized, the project aims to provide near-real-time, model-based risk forecasts for governments. The result: accurate, timely and actionable advice for farmers to respond proactively to migrating wheat diseases.
The Challenge
Farmers growing wheat face pathogen pressures from a range of sources. Two of the most damaging are the fungal diseases known as rust and blast. Rust is a chronic issue for farmers in all parts of the world. A study in 2015 estimated that the three rust diseases â stem, stripe and leaf â destroyed more than 15 million tons of wheat at a cost of nearly $3 billion worldwide. Wheat blast is an increasing threat to wheat production and has been detected in both Bangladesh and Zambia. Each of these diseases can destroy entire harvests without warning, wiping out critical income and food security for resource-poor farmers in vulnerable areas.
The Response
Weather forecasts and early-warning alerts are modern technologies that people rely on for actionable information in the case of severe weather. Now imagine a system that lets farmers know in advance when dangerous conditions will threaten their crop in the field. Wheat DEWAS aims to do just that through a scalable, integrated, and sustainable global surveillance and monitoring system for wheat.
Wheat DEWAS brings together research expertise from 23 research and academic organizations from sub-Saharan Africa, South Asia, Europe, the United States and Mexico.
Together, the researchers are focused on six interlinked work packages:Â
Work package
Lead
Objectives
Data Management
Aarhus University; Global Rust Reference Center
Maintain, strengthen and expand the functionality of the existing Wheat Rust Toolbox data management system
Create new modules within the Toolbox to include wheat blast and relevant wheat host information
Consolidate and integrate datasets from all the participating wheat rust diagnostic labs
Develop an API for the two-way exchange of data between the Toolbox and the Delphi data stack
Develop an API for direct access to quality-controlled surveillance data as inputs for forecast models
Ensure fair access to data
Epidemiological Models
Cambridge University
Maintain operational deployment and extend geographical range
Productionalize code for long-term sustainability
Multiple input sources (expert, crowd, media)
Continue model validation
Ensure flexibility for management scenario testing
Extend framework for wheat blast
Surveillance (host + pathogen)
CIMMYT
Undertake near-real-time, standardized surveys and sampling in the target regions
Expand the coverage and frequency of field surveillance
Implement fully electronic field surveillance that permits near real-time data gathering
Target surveillance and diagnostic sampling to validate model predictions
Map vulnerability of the host landscape
Diagnostics
John Innes Centre
Strengthen existing diagnostic network in target regions & track changes & movement
Develop & integrate new diagnostic methodology for wheat rusts & blast
Align national diagnostic results to provide a regional & global context
Enhance national capacity for wheat rust & blast diagnostics
Information Dissemination and Visualization Tools
PlantVillage; Penn State
Create a suite of information layers and visualization products that are automatically derived from the quality-controlled data management system and delivered to end users in a timely manner
Deliver near real time for national partners to develop reliable and actionable advisory and alert information to extension workers, farmers and policy makers
National Partner Capacity Building
Cornell University
Strengthening National partner capacity on pathogen surveillance, diagnostics, modeling, data management, early warning assessment, and open science publishing
CIMMYT Global Maize Program Director and CGIAR Plant Health Initiative Lead, BM Prasanna cutting a ribbon at the entrance of a new shed housing, marking the commissioning of five new seed drying machines courtesy of the of the Accelerating Genetic Gains (AGG) Project. (Photo: Susan Otieno/CIMMYT)
Kenya Agricultural and Livestock Research Organization (KALRO)âs research station at Kiboko, Kenya, where several partner institutions including the International Maize and Wheat Improvement Center (CIMMYT), conduct significant research activities on crop breeding and seed systems, is now equipped with five new seed drying machines along with a dedicated shed to house these units, a cold room for storing breeding materials, and an additional irrigation dam/reservoir. These infrastructural upgrades are worth approximately US $0.5 million.
During the commissioning of the new facilities on February 7, 2023, CIMMYT Global Maize Program Director, BM Prasanna thanked the donors, Crops to End Hunger (CtEH) Initiative and Accelerated Genetic Gains (AGG) project, that supported the upgrade of the research station, and recognized the strong partnership with KALRO.
âToday is a major milestone for CIMMYT, together with KALRO, hosting this center of excellence for crop breeding. This facility is one of the largest public sector crop breeding facilities in the world, with hundreds of hectares dedicated to crop breeding. These new facilities will enable CIMMYT and KALRO crop breeders to optimize their breeding and seed systems’ work and provide better varieties to the farming communities,â said Prasanna.
Kenya suffered one of its worst droughts ever in 2022, and the newly commissioned facilities will support expedited development of climate-resilient and nutritious crop varieties, including resistance to major diseases and pests.
Visitors at the KALRO research station in Kiboko, Kenya, looking at the newly commissioned cold room storage. (Photo: Susan Otieno/CIMMYT)
Improvements and enhancements
The efficiency of the seed driers capabilities to quickly reduce moisture content in seed from above 30% to 12% in two to three days, reducing the time taken for seed drying and allowing for more than two crop seasons per year in a crop like maize.
The additional water reservoir with a capacity of 16,500 cubic meters will eliminate irrigation emergencies and will also enhance the field research capacity at Kiboko. Reliable irrigation is essential for accelerating breeding cycles.
At the same time, the new cold room can preserve the seeds up to two years, preventing the loss of valuable genetic materials and saving costs associated with frequent regeneration of seeds.
KALRO Director General Eliud Kireger officiating the opening of the cold room storage facility at KALRO research station at Kiboko, Kenya. Looking on is CIMMYT Global Maize Program Director, BM Prasanna. (Photo: Susan Otieno/CIMMYT)
World-class research center
âThe Kiboko Research Center is indeed growing into an elite research facility that can serve communities in entire sub-Saharan Africa through a pipeline of improved varieties, not only for maize but in other important crops. This will not only improve climate resilience and nutrition, but will contribute to enhanced food and income security for several million smallholder farmers,â said Prasanna.
KALRO Director General Eliud Kireger appreciated the establishment of the new facilities and thanked CIMMYT and its partners for their support.
âToday is a very important day for us because we are launching new and improved facilities for research to support breeding work and quality seed production. This research station is in Makueni County, a very dry area yet important place for research because there is adequate space, especially for breeding,â said Kireger. âWe are significantly improving the infrastructure at Kiboko to produce and deliver better seed to our farmers.â
For more than three decades, CIMMYT has conducted research trials at the Kiboko Research Station, focusing on drought tolerance, nitrogen use efficiency, and resistance to pests and diseases, such as fall armyworm and stem borer. The maize Double Haploid (DH) facility established in 2013 at Kiboko, with the support of the Bill & Melinda Gates Foundation, offers DH line production service for organizations throughout Africa, and is key to increasing genetic gains in maize breeding.
